Gene : Medtr1g029840 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Description:  NAD-dependent aldehyde dehydrogenase family protein
Genomic Order:  1383 Name:  ? Medtr1g029840
Secondary Identifier:  ? PAC:31093535
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-2724 Medicago truncatula pathologic  
Mtruncatula PWY-6054 Medicago truncatula pathologic  
Mtruncatula PWY-6313 Medicago truncatula pathologic  
Mtruncatula PWY66-21 Medicago truncatula pathologic  
Mtruncatula PWY66-389 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g029840 0.5kb upstream 0.5kb upstream 9481 true chr1: 10360290-10369770 Medicago truncatula
Medtr1g029840 0.5kb upstream 0.5kb upstream 500 false chr1: 10369271-10369770 Medicago truncatula
Medtr1g029840 0.5kb downstream 0.5kb downstream 9481 true chr1: 10359790-10369270 Medicago truncatula
Medtr1g029840 0.5kb downstream 0.5kb downstream 500 false chr1: 10359790-10360289 Medicago truncatula
Medtr1g029840 1.0kb upstream 1.0kb upstream 9981 true chr1: 10360290-10370270 Medicago truncatula
Medtr1g029840 1.0kb upstream 1.0kb upstream 1000 false chr1: 10369271-10370270 Medicago truncatula
Medtr1g029840 1.0kb downstream 1.0kb downstream 9981 true chr1: 10359290-10369270 Medicago truncatula
Medtr1g029840 1.0kb downstream 1.0kb downstream 1000 false chr1: 10359290-10360289 Medicago truncatula
Medtr1g029840 2.0kb upstream 2.0kb upstream 10981 true chr1: 10360290-10371270 Medicago truncatula
Medtr1g029840 2.0kb upstream 2.0kb upstream 2000 false chr1: 10369271-10371270 Medicago truncatula
Medtr1g029840 2.0kb downstream 2.0kb downstream 10981 true chr1: 10358290-10369270 Medicago truncatula
Medtr1g029840 2.0kb downstream 2.0kb downstream 2000 false chr1: 10358290-10360289 Medicago truncatula
Medtr1g029840 5.0kb upstream 5.0kb upstream 13981 true chr1: 10360290-10374270 Medicago truncatula
Medtr1g029840 5.0kb upstream 5.0kb upstream 5000 false chr1: 10369271-10374270 Medicago truncatula
Medtr1g029840 5.0kb downstream 5.0kb downstream 13981 true chr1: 10355290-10369270 Medicago truncatula
Medtr1g029840 5.0kb downstream 5.0kb downstream 5000 false chr1: 10355290-10360289 Medicago truncatula
Medtr1g029840 10.0kb upstream 10.0kb upstream 18981 true chr1: 10360290-10379270 Medicago truncatula
Medtr1g029840 10.0kb upstream 10.0kb upstream 10000 false chr1: 10369271-10379270 Medicago truncatula
Medtr1g029840 10.0kb downstream 10.0kb downstream 18981 true chr1: 10350290-10369270 Medicago truncatula
Medtr1g029840 10.0kb downstream 10.0kb downstream 10000 false chr1: 10350290-10360289 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302333 5265 Fabidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.468       High
cufflinks 0.882        
cufflinks 1.991        
cufflinks 0.503       Low
cufflinks 1.817        
cufflinks 0.513       Low
cufflinks 2.464       High
cufflinks 0.995        
cufflinks 1.949        

0 Strain