Gene : Medtr1g051380 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22748//PTHR22748:SF8 - AP ENDONUCLEASE Description:  apurinic endonuclease-redox protein
Genomic Order:  2609 Name:  ? Medtr1g051380
Secondary Identifier:  ? PAC:31099180
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g051380 0.5kb upstream 0.5kb upstream 7545 true chr1: 20150935-20158479 Medicago truncatula
Medtr1g051380 0.5kb upstream 0.5kb upstream 500 false chr1: 20157980-20158479 Medicago truncatula
Medtr1g051380 0.5kb downstream 0.5kb downstream 7545 true chr1: 20150435-20157979 Medicago truncatula
Medtr1g051380 0.5kb downstream 0.5kb downstream 500 false chr1: 20150435-20150934 Medicago truncatula
Medtr1g051380 1.0kb upstream 1.0kb upstream 8045 true chr1: 20150935-20158979 Medicago truncatula
Medtr1g051380 1.0kb upstream 1.0kb upstream 1000 false chr1: 20157980-20158979 Medicago truncatula
Medtr1g051380 1.0kb downstream 1.0kb downstream 8045 true chr1: 20149935-20157979 Medicago truncatula
Medtr1g051380 1.0kb downstream 1.0kb downstream 1000 false chr1: 20149935-20150934 Medicago truncatula
Medtr1g051380 2.0kb upstream 2.0kb upstream 9045 true chr1: 20150935-20159979 Medicago truncatula
Medtr1g051380 2.0kb upstream 2.0kb upstream 2000 false chr1: 20157980-20159979 Medicago truncatula
Medtr1g051380 2.0kb downstream 2.0kb downstream 9045 true chr1: 20148935-20157979 Medicago truncatula
Medtr1g051380 2.0kb downstream 2.0kb downstream 2000 false chr1: 20148935-20150934 Medicago truncatula
Medtr1g051380 5.0kb upstream 5.0kb upstream 12045 true chr1: 20150935-20162979 Medicago truncatula
Medtr1g051380 5.0kb upstream 5.0kb upstream 5000 false chr1: 20157980-20162979 Medicago truncatula
Medtr1g051380 5.0kb downstream 5.0kb downstream 12045 true chr1: 20145935-20157979 Medicago truncatula
Medtr1g051380 5.0kb downstream 5.0kb downstream 5000 false chr1: 20145935-20150934 Medicago truncatula
Medtr1g051380 10.0kb upstream 10.0kb upstream 17045 true chr1: 20150935-20167979 Medicago truncatula
Medtr1g051380 10.0kb upstream 10.0kb upstream 10000 false chr1: 20157980-20167979 Medicago truncatula
Medtr1g051380 10.0kb downstream 10.0kb downstream 17045 true chr1: 20140935-20157979 Medicago truncatula
Medtr1g051380 10.0kb downstream 10.0kb downstream 10000 false chr1: 20140935-20150934 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308340 5265 Fabidae View MSA
124050350 5270 Rosid View MSA
123737075 5271 Pentapetalae View MSA
122792202 5272 Eudicot View MSA
122048084 5273 Angiosperm View MSA
121344358 5274 Embryophyte View MSA
123426911 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.303        
cufflinks 0.233        
cufflinks 0.268        
cufflinks 0.075       Low
cufflinks 0.476       High
cufflinks 0.058     Low Low
cufflinks 0.214        
cufflinks 0.248        
cufflinks 0.164        

0 Strain