Gene : Medtr1g059270 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12565:SF112 - TRANSCRIPTION FACTOR BHLH48-RELATED Description:  transcription factor
Genomic Order:  2723 Name:  ? Medtr1g059270
Secondary Identifier:  ? PAC:31100121
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g059270 0.5kb upstream 0.5kb upstream 6437 true chr1: 21507503-21513939 Medicago truncatula
Medtr1g059270 0.5kb upstream 0.5kb upstream 500 false chr1: 21507503-21508002 Medicago truncatula
Medtr1g059270 0.5kb downstream 0.5kb downstream 6437 true chr1: 21508003-21514439 Medicago truncatula
Medtr1g059270 0.5kb downstream 0.5kb downstream 500 false chr1: 21513940-21514439 Medicago truncatula
Medtr1g059270 1.0kb upstream 1.0kb upstream 6937 true chr1: 21507003-21513939 Medicago truncatula
Medtr1g059270 1.0kb upstream 1.0kb upstream 1000 false chr1: 21507003-21508002 Medicago truncatula
Medtr1g059270 1.0kb downstream 1.0kb downstream 6937 true chr1: 21508003-21514939 Medicago truncatula
Medtr1g059270 1.0kb downstream 1.0kb downstream 1000 false chr1: 21513940-21514939 Medicago truncatula
Medtr1g059270 2.0kb upstream 2.0kb upstream 7937 true chr1: 21506003-21513939 Medicago truncatula
Medtr1g059270 2.0kb upstream 2.0kb upstream 2000 false chr1: 21506003-21508002 Medicago truncatula
Medtr1g059270 2.0kb downstream 2.0kb downstream 7937 true chr1: 21508003-21515939 Medicago truncatula
Medtr1g059270 2.0kb downstream 2.0kb downstream 2000 false chr1: 21513940-21515939 Medicago truncatula
Medtr1g059270 5.0kb upstream 5.0kb upstream 10937 true chr1: 21503003-21513939 Medicago truncatula
Medtr1g059270 5.0kb upstream 5.0kb upstream 5000 false chr1: 21503003-21508002 Medicago truncatula
Medtr1g059270 5.0kb downstream 5.0kb downstream 10937 true chr1: 21508003-21518939 Medicago truncatula
Medtr1g059270 5.0kb downstream 5.0kb downstream 5000 false chr1: 21513940-21518939 Medicago truncatula
Medtr1g059270 10.0kb upstream 10.0kb upstream 15937 true chr1: 21498003-21513939 Medicago truncatula
Medtr1g059270 10.0kb upstream 10.0kb upstream 10000 false chr1: 21498003-21508002 Medicago truncatula
Medtr1g059270 10.0kb downstream 10.0kb downstream 15937 true chr1: 21508003-21523939 Medicago truncatula
Medtr1g059270 10.0kb downstream 10.0kb downstream 10000 false chr1: 21513940-21523939 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296564 5265 Fabidae View MSA
124063738 5270 Rosid View MSA
123737117 5271 Pentapetalae View MSA
122769887 5272 Eudicot View MSA
122044005 5273 Angiosperm View MSA
121310224 5274 Embryophyte View MSA
123347772 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.247        
cufflinks 1.047       High
cufflinks 0.797        
cufflinks 0.085       Low
cufflinks 1.14       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.104       Low
cufflinks 0.785        
cufflinks 0.139        

0 Strain