Gene : Medtr1g022235 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13930 - RSAFD1-RELATED Description:  flavodoxin family protein
Genomic Order:  912 Name:  ? Medtr1g022235
Secondary Identifier:  ? PAC:31095107
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7283 Medicago truncatula pathologic  
Mtruncatula PWY-7286 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g022235 0.5kb upstream 0.5kb upstream 3805 true chr1: 6959692-6963496 Medicago truncatula
Medtr1g022235 0.5kb upstream 0.5kb upstream 500 false chr1: 6959692-6960191 Medicago truncatula
Medtr1g022235 0.5kb downstream 0.5kb downstream 3805 true chr1: 6960192-6963996 Medicago truncatula
Medtr1g022235 0.5kb downstream 0.5kb downstream 500 false chr1: 6963497-6963996 Medicago truncatula
Medtr1g022235 1.0kb upstream 1.0kb upstream 4305 true chr1: 6959192-6963496 Medicago truncatula
Medtr1g022235 1.0kb upstream 1.0kb upstream 1000 false chr1: 6959192-6960191 Medicago truncatula
Medtr1g022235 1.0kb downstream 1.0kb downstream 4305 true chr1: 6960192-6964496 Medicago truncatula
Medtr1g022235 1.0kb downstream 1.0kb downstream 1000 false chr1: 6963497-6964496 Medicago truncatula
Medtr1g022235 2.0kb upstream 2.0kb upstream 5305 true chr1: 6958192-6963496 Medicago truncatula
Medtr1g022235 2.0kb upstream 2.0kb upstream 2000 false chr1: 6958192-6960191 Medicago truncatula
Medtr1g022235 2.0kb downstream 2.0kb downstream 5305 true chr1: 6960192-6965496 Medicago truncatula
Medtr1g022235 2.0kb downstream 2.0kb downstream 2000 false chr1: 6963497-6965496 Medicago truncatula
Medtr1g022235 5.0kb upstream 5.0kb upstream 8305 true chr1: 6955192-6963496 Medicago truncatula
Medtr1g022235 5.0kb upstream 5.0kb upstream 5000 false chr1: 6955192-6960191 Medicago truncatula
Medtr1g022235 5.0kb downstream 5.0kb downstream 8305 true chr1: 6960192-6968496 Medicago truncatula
Medtr1g022235 5.0kb downstream 5.0kb downstream 5000 false chr1: 6963497-6968496 Medicago truncatula
Medtr1g022235 10.0kb upstream 10.0kb upstream 13305 true chr1: 6950192-6963496 Medicago truncatula
Medtr1g022235 10.0kb upstream 10.0kb upstream 10000 false chr1: 6950192-6960191 Medicago truncatula
Medtr1g022235 10.0kb downstream 10.0kb downstream 13305 true chr1: 6960192-6973496 Medicago truncatula
Medtr1g022235 10.0kb downstream 10.0kb downstream 10000 false chr1: 6963497-6973496 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311762 5265 Fabidae View MSA
124066896 5270 Rosid View MSA
123737792 5271 Pentapetalae View MSA
122788596 5272 Eudicot View MSA
122045303 5273 Angiosperm View MSA
121343824 5274 Embryophyte View MSA
123426537 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.684        
cufflinks 5.017        
cufflinks 7.38        
cufflinks 4.824        
cufflinks 7.526        
cufflinks 1.743       Low
cufflinks 6.215        
cufflinks 6.06        
cufflinks 7.528        

0 Strain