Gene : Cucsa.374160 C. sativus v1.0
Defline:  (1 of 1) PF09668 - Aspartyl protease (Asp_protease) Genomic Order:  7
Name:  ? Cucsa.374160 Secondary Identifier:  ? PAC:16981878
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.374160 0.5kb upstream 0.5kb upstream 2200 true scaffold03733: 58888-61087 Cucumis sativus
Cucsa.374160 0.5kb upstream 0.5kb upstream 500 false scaffold03733: 60588-61087 Cucumis sativus
Cucsa.374160 0.5kb downstream 0.5kb downstream 2200 true scaffold03733: 58388-60587 Cucumis sativus
Cucsa.374160 0.5kb downstream 0.5kb downstream 500 false scaffold03733: 58388-58887 Cucumis sativus
Cucsa.374160 1.0kb upstream 1.0kb upstream 2700 true scaffold03733: 58888-61587 Cucumis sativus
Cucsa.374160 1.0kb upstream 1.0kb upstream 1000 false scaffold03733: 60588-61587 Cucumis sativus
Cucsa.374160 1.0kb downstream 1.0kb downstream 2700 true scaffold03733: 57888-60587 Cucumis sativus
Cucsa.374160 1.0kb downstream 1.0kb downstream 1000 false scaffold03733: 57888-58887 Cucumis sativus
Cucsa.374160 2.0kb upstream 2.0kb upstream 3700 true scaffold03733: 58888-62587 Cucumis sativus
Cucsa.374160 2.0kb upstream 2.0kb upstream 2000 false scaffold03733: 60588-62587 Cucumis sativus
Cucsa.374160 2.0kb downstream 2.0kb downstream 3700 true scaffold03733: 56888-60587 Cucumis sativus
Cucsa.374160 2.0kb downstream 2.0kb downstream 2000 false scaffold03733: 56888-58887 Cucumis sativus
Cucsa.374160 5.0kb upstream 5.0kb upstream 6700 true scaffold03733: 58888-65587 Cucumis sativus
Cucsa.374160 5.0kb upstream 5.0kb upstream 5000 false scaffold03733: 60588-65587 Cucumis sativus
Cucsa.374160 5.0kb downstream 5.0kb downstream 6700 true scaffold03733: 53888-60587 Cucumis sativus
Cucsa.374160 5.0kb downstream 5.0kb downstream 5000 false scaffold03733: 53888-58887 Cucumis sativus
Cucsa.374160 10.0kb upstream 10.0kb upstream 11700 true scaffold03733: 58888-70587 Cucumis sativus
Cucsa.374160 10.0kb upstream 10.0kb upstream 10000 false scaffold03733: 60588-70587 Cucumis sativus
Cucsa.374160 10.0kb downstream 10.0kb downstream 11700 true scaffold03733: 48888-60587 Cucumis sativus
Cucsa.374160 10.0kb downstream 10.0kb downstream 10000 false scaffold03733: 48888-58887 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606061 5273 Angiosperm Singleton cluster - no MSA
122236329 5265 Fabidae Singleton cluster - no MSA
123982540 5270 Rosid Singleton cluster - no MSA
123558215 5271 Pentapetalae Singleton cluster - no MSA
122593029 5272 Eudicot Singleton cluster - no MSA
120878351 5274 Embryophyte Singleton cluster - no MSA
122919240 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain