Gene : Cucsa.311000 C. sativus v1.0

Defline:  (1 of 3) PTHR24093:SF355 - ATPASE 1, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  91
Name:  ? Cucsa.311000 Secondary Identifier:  ? PAC:16976618

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.311000 0.5kb upstream 0.5kb upstream 5737 true scaffold02995: 674787-680523 Cucumis sativus
Cucsa.311000 0.5kb upstream 0.5kb upstream 500 false scaffold02995: 674787-675286 Cucumis sativus
Cucsa.311000 0.5kb downstream 0.5kb downstream 5737 true scaffold02995: 675287-681023 Cucumis sativus
Cucsa.311000 0.5kb downstream 0.5kb downstream 500 false scaffold02995: 680524-681023 Cucumis sativus
Cucsa.311000 1.0kb upstream 1.0kb upstream 6237 true scaffold02995: 674287-680523 Cucumis sativus
Cucsa.311000 1.0kb upstream 1.0kb upstream 1000 false scaffold02995: 674287-675286 Cucumis sativus
Cucsa.311000 1.0kb downstream 1.0kb downstream 6237 true scaffold02995: 675287-681523 Cucumis sativus
Cucsa.311000 1.0kb downstream 1.0kb downstream 1000 false scaffold02995: 680524-681523 Cucumis sativus
Cucsa.311000 2.0kb upstream 2.0kb upstream 7237 true scaffold02995: 673287-680523 Cucumis sativus
Cucsa.311000 2.0kb upstream 2.0kb upstream 2000 false scaffold02995: 673287-675286 Cucumis sativus
Cucsa.311000 2.0kb downstream 2.0kb downstream 7237 true scaffold02995: 675287-682523 Cucumis sativus
Cucsa.311000 2.0kb downstream 2.0kb downstream 2000 false scaffold02995: 680524-682523 Cucumis sativus
Cucsa.311000 5.0kb upstream 5.0kb upstream 10237 true scaffold02995: 670287-680523 Cucumis sativus
Cucsa.311000 5.0kb upstream 5.0kb upstream 5000 false scaffold02995: 670287-675286 Cucumis sativus
Cucsa.311000 5.0kb downstream 5.0kb downstream 10237 true scaffold02995: 675287-685523 Cucumis sativus
Cucsa.311000 5.0kb downstream 5.0kb downstream 5000 false scaffold02995: 680524-685523 Cucumis sativus
Cucsa.311000 10.0kb upstream 10.0kb upstream 15237 true scaffold02995: 665287-680523 Cucumis sativus
Cucsa.311000 10.0kb upstream 10.0kb upstream 10000 false scaffold02995: 665287-675286 Cucumis sativus
Cucsa.311000 10.0kb downstream 10.0kb downstream 15237 true scaffold02995: 675287-690523 Cucumis sativus
Cucsa.311000 10.0kb downstream 10.0kb downstream 10000 false scaffold02995: 680524-690523 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605275 5273 Angiosperm Singleton cluster - no MSA
122235539 5265 Fabidae Singleton cluster - no MSA
123981754 5270 Rosid Singleton cluster - no MSA
123557429 5271 Pentapetalae Singleton cluster - no MSA
122592243 5272 Eudicot Singleton cluster - no MSA
120877565 5274 Embryophyte Singleton cluster - no MSA
122918454 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain