Gene : Cucsa.308580 C. sativus v1.0
Defline:  (1 of 1) PTHR11679:SF1 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 33B Genomic Order:  84
Name:  ? Cucsa.308580 Secondary Identifier:  ? PAC:16976377
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.308580 0.5kb upstream 0.5kb upstream 8495 true scaffold02978: 637961-646455 Cucumis sativus
Cucsa.308580 0.5kb upstream 0.5kb upstream 500 false scaffold02978: 645956-646455 Cucumis sativus
Cucsa.308580 0.5kb downstream 0.5kb downstream 8495 true scaffold02978: 637461-645955 Cucumis sativus
Cucsa.308580 0.5kb downstream 0.5kb downstream 500 false scaffold02978: 637461-637960 Cucumis sativus
Cucsa.308580 1.0kb upstream 1.0kb upstream 8995 true scaffold02978: 637961-646955 Cucumis sativus
Cucsa.308580 1.0kb upstream 1.0kb upstream 1000 false scaffold02978: 645956-646955 Cucumis sativus
Cucsa.308580 1.0kb downstream 1.0kb downstream 8995 true scaffold02978: 636961-645955 Cucumis sativus
Cucsa.308580 1.0kb downstream 1.0kb downstream 1000 false scaffold02978: 636961-637960 Cucumis sativus
Cucsa.308580 2.0kb upstream 2.0kb upstream 9995 true scaffold02978: 637961-647955 Cucumis sativus
Cucsa.308580 2.0kb upstream 2.0kb upstream 2000 false scaffold02978: 645956-647955 Cucumis sativus
Cucsa.308580 2.0kb downstream 2.0kb downstream 9995 true scaffold02978: 635961-645955 Cucumis sativus
Cucsa.308580 2.0kb downstream 2.0kb downstream 2000 false scaffold02978: 635961-637960 Cucumis sativus
Cucsa.308580 5.0kb upstream 5.0kb upstream 12995 true scaffold02978: 637961-650955 Cucumis sativus
Cucsa.308580 5.0kb upstream 5.0kb upstream 5000 false scaffold02978: 645956-650955 Cucumis sativus
Cucsa.308580 5.0kb downstream 5.0kb downstream 12995 true scaffold02978: 632961-645955 Cucumis sativus
Cucsa.308580 5.0kb downstream 5.0kb downstream 5000 false scaffold02978: 632961-637960 Cucumis sativus
Cucsa.308580 10.0kb upstream 10.0kb upstream 17995 true scaffold02978: 637961-655955 Cucumis sativus
Cucsa.308580 10.0kb upstream 10.0kb upstream 10000 false scaffold02978: 645956-655955 Cucumis sativus
Cucsa.308580 10.0kb downstream 10.0kb downstream 17995 true scaffold02978: 627961-645955 Cucumis sativus
Cucsa.308580 10.0kb downstream 10.0kb downstream 10000 false scaffold02978: 627961-637960 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303848 5265 Fabidae View MSA
124060687 5270 Rosid View MSA
123752056 5271 Pentapetalae View MSA
122787734 5272 Eudicot View MSA
122044199 5273 Angiosperm View MSA
121343889 5274 Embryophyte View MSA
123428072 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain