Gene : Cucsa.247820 C. sativus v1.0
Defline:  (1 of 2) PTHR13301:SF60 - CELLULOSE SYNTHASE-LIKE PROTEIN E1 Genomic Order:  10
Name:  ? Cucsa.247820 Secondary Identifier:  ? PAC:16971451
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1001 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.247820 0.5kb upstream 0.5kb upstream 4304 true scaffold02205: 159210-163513 Cucumis sativus
Cucsa.247820 0.5kb upstream 0.5kb upstream 500 false scaffold02205: 159210-159709 Cucumis sativus
Cucsa.247820 0.5kb downstream 0.5kb downstream 4304 true scaffold02205: 159710-164013 Cucumis sativus
Cucsa.247820 0.5kb downstream 0.5kb downstream 500 false scaffold02205: 163514-164013 Cucumis sativus
Cucsa.247820 1.0kb upstream 1.0kb upstream 4804 true scaffold02205: 158710-163513 Cucumis sativus
Cucsa.247820 1.0kb upstream 1.0kb upstream 1000 false scaffold02205: 158710-159709 Cucumis sativus
Cucsa.247820 1.0kb downstream 1.0kb downstream 4804 true scaffold02205: 159710-164513 Cucumis sativus
Cucsa.247820 1.0kb downstream 1.0kb downstream 1000 false scaffold02205: 163514-164513 Cucumis sativus
Cucsa.247820 2.0kb upstream 2.0kb upstream 5804 true scaffold02205: 157710-163513 Cucumis sativus
Cucsa.247820 2.0kb upstream 2.0kb upstream 2000 false scaffold02205: 157710-159709 Cucumis sativus
Cucsa.247820 2.0kb downstream 2.0kb downstream 5804 true scaffold02205: 159710-165513 Cucumis sativus
Cucsa.247820 2.0kb downstream 2.0kb downstream 2000 false scaffold02205: 163514-165513 Cucumis sativus
Cucsa.247820 5.0kb upstream 5.0kb upstream 8804 true scaffold02205: 154710-163513 Cucumis sativus
Cucsa.247820 5.0kb upstream 5.0kb upstream 5000 false scaffold02205: 154710-159709 Cucumis sativus
Cucsa.247820 5.0kb downstream 5.0kb downstream 8804 true scaffold02205: 159710-168513 Cucumis sativus
Cucsa.247820 5.0kb downstream 5.0kb downstream 5000 false scaffold02205: 163514-168513 Cucumis sativus
Cucsa.247820 10.0kb upstream 10.0kb upstream 13804 true scaffold02205: 149710-163513 Cucumis sativus
Cucsa.247820 10.0kb upstream 10.0kb upstream 10000 false scaffold02205: 149710-159709 Cucumis sativus
Cucsa.247820 10.0kb downstream 10.0kb downstream 13804 true scaffold02205: 159710-173513 Cucumis sativus
Cucsa.247820 10.0kb downstream 10.0kb downstream 10000 false scaffold02205: 163514-173513 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299327 5265 Fabidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain