Gene : Cucsa.238760 C. sativus v1.0
Defline:  (1 of 34) PF08284 - Retroviral aspartyl protease (RVP_2) Genomic Order:  1
Name:  ? Cucsa.238760 Secondary Identifier:  ? PAC:16970734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.238760 0.5kb upstream 0.5kb upstream 1118 true scaffold02036: 87-1204 Cucumis sativus
Cucsa.238760 0.5kb upstream 0.5kb upstream 44 false scaffold02036: 1161-1204 Cucumis sativus
Cucsa.238760 0.5kb downstream 0.5kb downstream 1160 true scaffold02036: 1-1160 Cucumis sativus
Cucsa.238760 0.5kb downstream 0.5kb downstream 86 false scaffold02036: 1-86 Cucumis sativus
Cucsa.238760 1.0kb upstream 1.0kb upstream 1118 true scaffold02036: 87-1204 Cucumis sativus
Cucsa.238760 1.0kb upstream 1.0kb upstream 44 false scaffold02036: 1161-1204 Cucumis sativus
Cucsa.238760 1.0kb downstream 1.0kb downstream 1160 true scaffold02036: 1-1160 Cucumis sativus
Cucsa.238760 1.0kb downstream 1.0kb downstream 86 false scaffold02036: 1-86 Cucumis sativus
Cucsa.238760 2.0kb upstream 2.0kb upstream 1118 true scaffold02036: 87-1204 Cucumis sativus
Cucsa.238760 2.0kb upstream 2.0kb upstream 44 false scaffold02036: 1161-1204 Cucumis sativus
Cucsa.238760 2.0kb downstream 2.0kb downstream 1160 true scaffold02036: 1-1160 Cucumis sativus
Cucsa.238760 2.0kb downstream 2.0kb downstream 86 false scaffold02036: 1-86 Cucumis sativus
Cucsa.238760 5.0kb upstream 5.0kb upstream 1118 true scaffold02036: 87-1204 Cucumis sativus
Cucsa.238760 5.0kb upstream 5.0kb upstream 44 false scaffold02036: 1161-1204 Cucumis sativus
Cucsa.238760 5.0kb downstream 5.0kb downstream 1160 true scaffold02036: 1-1160 Cucumis sativus
Cucsa.238760 5.0kb downstream 5.0kb downstream 86 false scaffold02036: 1-86 Cucumis sativus
Cucsa.238760 10.0kb upstream 10.0kb upstream 1118 true scaffold02036: 87-1204 Cucumis sativus
Cucsa.238760 10.0kb upstream 10.0kb upstream 44 false scaffold02036: 1161-1204 Cucumis sativus
Cucsa.238760 10.0kb downstream 10.0kb downstream 1160 true scaffold02036: 1-1160 Cucumis sativus
Cucsa.238760 10.0kb downstream 10.0kb downstream 86 false scaffold02036: 1-86 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606589 5273 Angiosperm View MSA
122236859 5265 Fabidae View MSA
123983069 5270 Rosid View MSA
123558743 5271 Pentapetalae View MSA
122593557 5272 Eudicot View MSA
120878879 5274 Embryophyte View MSA
122919768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain