Gene : Cucsa.202060 C. sativus v1.0
Defline:  (1 of 5) 2.5.1.16 - Spermidine synthase / Putrescine aminopropyltransferase Genomic Order:  35
Name:  ? Cucsa.202060 Secondary Identifier:  ? PAC:16968930
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus BSUBPOLYAMSYN-PWY Cucumis sativus pathologic  
Csativus POLYAMINSYN3-PWY Cucumis sativus pathologic  
Csativus PWY-7528 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.202060 0.5kb upstream 0.5kb upstream 5274 true scaffold01376: 216529-221802 Cucumis sativus
Cucsa.202060 0.5kb upstream 0.5kb upstream 500 false scaffold01376: 221303-221802 Cucumis sativus
Cucsa.202060 0.5kb downstream 0.5kb downstream 5274 true scaffold01376: 216029-221302 Cucumis sativus
Cucsa.202060 0.5kb downstream 0.5kb downstream 500 false scaffold01376: 216029-216528 Cucumis sativus
Cucsa.202060 1.0kb upstream 1.0kb upstream 5774 true scaffold01376: 216529-222302 Cucumis sativus
Cucsa.202060 1.0kb upstream 1.0kb upstream 1000 false scaffold01376: 221303-222302 Cucumis sativus
Cucsa.202060 1.0kb downstream 1.0kb downstream 5774 true scaffold01376: 215529-221302 Cucumis sativus
Cucsa.202060 1.0kb downstream 1.0kb downstream 1000 false scaffold01376: 215529-216528 Cucumis sativus
Cucsa.202060 2.0kb upstream 2.0kb upstream 6774 true scaffold01376: 216529-223302 Cucumis sativus
Cucsa.202060 2.0kb upstream 2.0kb upstream 2000 false scaffold01376: 221303-223302 Cucumis sativus
Cucsa.202060 2.0kb downstream 2.0kb downstream 6774 true scaffold01376: 214529-221302 Cucumis sativus
Cucsa.202060 2.0kb downstream 2.0kb downstream 2000 false scaffold01376: 214529-216528 Cucumis sativus
Cucsa.202060 5.0kb upstream 5.0kb upstream 9774 true scaffold01376: 216529-226302 Cucumis sativus
Cucsa.202060 5.0kb upstream 5.0kb upstream 5000 false scaffold01376: 221303-226302 Cucumis sativus
Cucsa.202060 5.0kb downstream 5.0kb downstream 9774 true scaffold01376: 211529-221302 Cucumis sativus
Cucsa.202060 5.0kb downstream 5.0kb downstream 5000 false scaffold01376: 211529-216528 Cucumis sativus
Cucsa.202060 10.0kb upstream 10.0kb upstream 14774 true scaffold01376: 216529-231302 Cucumis sativus
Cucsa.202060 10.0kb upstream 10.0kb upstream 10000 false scaffold01376: 221303-231302 Cucumis sativus
Cucsa.202060 10.0kb downstream 10.0kb downstream 14774 true scaffold01376: 206529-221302 Cucumis sativus
Cucsa.202060 10.0kb downstream 10.0kb downstream 10000 false scaffold01376: 206529-216528 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304285 5265 Fabidae View MSA
124062886 5270 Rosid View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain