Gene : Cucsa.201940 C. sativus v1.0
Defline:  (1 of 13) KOG0417 - Ubiquitin-protein ligase Genomic Order:  23
Name:  ? Cucsa.201940 Secondary Identifier:  ? PAC:16968909
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.201940 0.5kb upstream 0.5kb upstream 3570 true scaffold01376: 135425-138994 Cucumis sativus
Cucsa.201940 0.5kb upstream 0.5kb upstream 500 false scaffold01376: 135425-135924 Cucumis sativus
Cucsa.201940 0.5kb downstream 0.5kb downstream 3570 true scaffold01376: 135925-139494 Cucumis sativus
Cucsa.201940 0.5kb downstream 0.5kb downstream 500 false scaffold01376: 138995-139494 Cucumis sativus
Cucsa.201940 1.0kb upstream 1.0kb upstream 4070 true scaffold01376: 134925-138994 Cucumis sativus
Cucsa.201940 1.0kb upstream 1.0kb upstream 1000 false scaffold01376: 134925-135924 Cucumis sativus
Cucsa.201940 1.0kb downstream 1.0kb downstream 4070 true scaffold01376: 135925-139994 Cucumis sativus
Cucsa.201940 1.0kb downstream 1.0kb downstream 1000 false scaffold01376: 138995-139994 Cucumis sativus
Cucsa.201940 2.0kb upstream 2.0kb upstream 5070 true scaffold01376: 133925-138994 Cucumis sativus
Cucsa.201940 2.0kb upstream 2.0kb upstream 2000 false scaffold01376: 133925-135924 Cucumis sativus
Cucsa.201940 2.0kb downstream 2.0kb downstream 5070 true scaffold01376: 135925-140994 Cucumis sativus
Cucsa.201940 2.0kb downstream 2.0kb downstream 2000 false scaffold01376: 138995-140994 Cucumis sativus
Cucsa.201940 5.0kb upstream 5.0kb upstream 8070 true scaffold01376: 130925-138994 Cucumis sativus
Cucsa.201940 5.0kb upstream 5.0kb upstream 5000 false scaffold01376: 130925-135924 Cucumis sativus
Cucsa.201940 5.0kb downstream 5.0kb downstream 8070 true scaffold01376: 135925-143994 Cucumis sativus
Cucsa.201940 5.0kb downstream 5.0kb downstream 5000 false scaffold01376: 138995-143994 Cucumis sativus
Cucsa.201940 10.0kb upstream 10.0kb upstream 13070 true scaffold01376: 125925-138994 Cucumis sativus
Cucsa.201940 10.0kb upstream 10.0kb upstream 10000 false scaffold01376: 125925-135924 Cucumis sativus
Cucsa.201940 10.0kb downstream 10.0kb downstream 13070 true scaffold01376: 135925-148994 Cucumis sativus
Cucsa.201940 10.0kb downstream 10.0kb downstream 10000 false scaffold01376: 138995-148994 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312683 5265 Fabidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain