Gene : Cucsa.197620 C. sativus v1.0
Defline:  (1 of 2) PTHR12300:SF52 - HVA22-LIKE PROTEIN A-RELATED Genomic Order:  141
Name:  ? Cucsa.197620 Secondary Identifier:  ? PAC:16968465
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.197620 0.5kb upstream 0.5kb upstream 3660 true scaffold01357: 955409-959068 Cucumis sativus
Cucsa.197620 0.5kb upstream 0.5kb upstream 500 false scaffold01357: 958569-959068 Cucumis sativus
Cucsa.197620 0.5kb downstream 0.5kb downstream 3660 true scaffold01357: 954909-958568 Cucumis sativus
Cucsa.197620 0.5kb downstream 0.5kb downstream 500 false scaffold01357: 954909-955408 Cucumis sativus
Cucsa.197620 1.0kb upstream 1.0kb upstream 4160 true scaffold01357: 955409-959568 Cucumis sativus
Cucsa.197620 1.0kb upstream 1.0kb upstream 1000 false scaffold01357: 958569-959568 Cucumis sativus
Cucsa.197620 1.0kb downstream 1.0kb downstream 4160 true scaffold01357: 954409-958568 Cucumis sativus
Cucsa.197620 1.0kb downstream 1.0kb downstream 1000 false scaffold01357: 954409-955408 Cucumis sativus
Cucsa.197620 2.0kb upstream 2.0kb upstream 5160 true scaffold01357: 955409-960568 Cucumis sativus
Cucsa.197620 2.0kb upstream 2.0kb upstream 2000 false scaffold01357: 958569-960568 Cucumis sativus
Cucsa.197620 2.0kb downstream 2.0kb downstream 5160 true scaffold01357: 953409-958568 Cucumis sativus
Cucsa.197620 2.0kb downstream 2.0kb downstream 2000 false scaffold01357: 953409-955408 Cucumis sativus
Cucsa.197620 5.0kb upstream 5.0kb upstream 8160 true scaffold01357: 955409-963568 Cucumis sativus
Cucsa.197620 5.0kb upstream 5.0kb upstream 5000 false scaffold01357: 958569-963568 Cucumis sativus
Cucsa.197620 5.0kb downstream 5.0kb downstream 8160 true scaffold01357: 950409-958568 Cucumis sativus
Cucsa.197620 5.0kb downstream 5.0kb downstream 5000 false scaffold01357: 950409-955408 Cucumis sativus
Cucsa.197620 10.0kb upstream 10.0kb upstream 13160 true scaffold01357: 955409-968568 Cucumis sativus
Cucsa.197620 10.0kb upstream 10.0kb upstream 10000 false scaffold01357: 958569-968568 Cucumis sativus
Cucsa.197620 10.0kb downstream 10.0kb downstream 13160 true scaffold01357: 945409-958568 Cucumis sativus
Cucsa.197620 10.0kb downstream 10.0kb downstream 10000 false scaffold01357: 945409-955408 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304250 5265 Fabidae View MSA
124065574 5270 Rosid View MSA
123753411 5271 Pentapetalae View MSA
122797924 5272 Eudicot View MSA
122050358 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain