Gene : CGLD37 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g392350 Defline:  (1 of 90) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1)
Genomic Order:  348 Name:  ? Cre09.g392350
Secondary Identifier:  ? PAC:30780381
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g392350 0.5kb upstream 0.5kb upstream 3357 true chromosome_9: 2295674-2299030 Chlamydomonas reinhardtii
Cre09.g392350 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 2298531-2299030 Chlamydomonas reinhardtii
Cre09.g392350 0.5kb downstream 0.5kb downstream 3357 true chromosome_9: 2295174-2298530 Chlamydomonas reinhardtii
Cre09.g392350 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 2295174-2295673 Chlamydomonas reinhardtii
Cre09.g392350 1.0kb upstream 1.0kb upstream 3857 true chromosome_9: 2295674-2299530 Chlamydomonas reinhardtii
Cre09.g392350 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 2298531-2299530 Chlamydomonas reinhardtii
Cre09.g392350 1.0kb downstream 1.0kb downstream 3857 true chromosome_9: 2294674-2298530 Chlamydomonas reinhardtii
Cre09.g392350 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 2294674-2295673 Chlamydomonas reinhardtii
Cre09.g392350 2.0kb upstream 2.0kb upstream 4857 true chromosome_9: 2295674-2300530 Chlamydomonas reinhardtii
Cre09.g392350 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 2298531-2300530 Chlamydomonas reinhardtii
Cre09.g392350 2.0kb downstream 2.0kb downstream 4857 true chromosome_9: 2293674-2298530 Chlamydomonas reinhardtii
Cre09.g392350 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 2293674-2295673 Chlamydomonas reinhardtii
Cre09.g392350 5.0kb upstream 5.0kb upstream 7857 true chromosome_9: 2295674-2303530 Chlamydomonas reinhardtii
Cre09.g392350 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 2298531-2303530 Chlamydomonas reinhardtii
Cre09.g392350 5.0kb downstream 5.0kb downstream 7857 true chromosome_9: 2290674-2298530 Chlamydomonas reinhardtii
Cre09.g392350 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 2290674-2295673 Chlamydomonas reinhardtii
Cre09.g392350 10.0kb upstream 10.0kb upstream 12857 true chromosome_9: 2295674-2308530 Chlamydomonas reinhardtii
Cre09.g392350 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 2298531-2308530 Chlamydomonas reinhardtii
Cre09.g392350 10.0kb downstream 10.0kb downstream 12857 true chromosome_9: 2285674-2298530 Chlamydomonas reinhardtii
Cre09.g392350 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 2285674-2295673 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113162 5260 Chlorophyte View MSA
123429142 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.517     High  
cufflinks 460.272     High  
cufflinks 594.733     High  
cufflinks 391.815     High  
cufflinks 400.484     High  
cufflinks 370.212     High  
cufflinks 565.159     High  
cufflinks 304.959     High  
cufflinks 110.886     High  
cufflinks 233.014     High  
cufflinks 501.194     High  
cufflinks 281.99     High  
cufflinks 300.228     High  
cufflinks 393.172     High  
cufflinks 292.252     High  
cufflinks 128.69     High  
cufflinks 3.499       Low
cufflinks 397.378     High  
cufflinks 300.111     High  
cufflinks 220.22     High  
cufflinks 315.919     High  
cufflinks 5.781       Low
cufflinks 263.815     High  
cufflinks 280.182     High  
cufflinks 1.507       Low
cufflinks 578.886 0.0 1208.51 High Low
cufflinks 513.155 0.0 1118.29 High  
cufflinks 217.261 0.0 515.752 High  
cufflinks 547.924 0.0 1127.23 High Low
cufflinks 1694.48 0.0 3620.42 High High

0 Strain