Gene : CSL4 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g312750 Defline:  (1 of 1) K07573 - exosome complex component CSL4 (CSL4, EXOSC1)
Genomic Order:  15 Name:  ? Cre07.g312750
Secondary Identifier:  ? PAC:30774237
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g312750 0.5kb upstream 0.5kb upstream 2989 true chromosome_7: 90060-93048 Chlamydomonas reinhardtii
Cre07.g312750 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 92549-93048 Chlamydomonas reinhardtii
Cre07.g312750 0.5kb downstream 0.5kb downstream 2989 true chromosome_7: 89560-92548 Chlamydomonas reinhardtii
Cre07.g312750 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 89560-90059 Chlamydomonas reinhardtii
Cre07.g312750 1.0kb upstream 1.0kb upstream 3489 true chromosome_7: 90060-93548 Chlamydomonas reinhardtii
Cre07.g312750 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 92549-93548 Chlamydomonas reinhardtii
Cre07.g312750 1.0kb downstream 1.0kb downstream 3489 true chromosome_7: 89060-92548 Chlamydomonas reinhardtii
Cre07.g312750 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 89060-90059 Chlamydomonas reinhardtii
Cre07.g312750 2.0kb upstream 2.0kb upstream 4489 true chromosome_7: 90060-94548 Chlamydomonas reinhardtii
Cre07.g312750 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 92549-94548 Chlamydomonas reinhardtii
Cre07.g312750 2.0kb downstream 2.0kb downstream 4489 true chromosome_7: 88060-92548 Chlamydomonas reinhardtii
Cre07.g312750 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 88060-90059 Chlamydomonas reinhardtii
Cre07.g312750 5.0kb upstream 5.0kb upstream 7489 true chromosome_7: 90060-97548 Chlamydomonas reinhardtii
Cre07.g312750 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 92549-97548 Chlamydomonas reinhardtii
Cre07.g312750 5.0kb downstream 5.0kb downstream 7489 true chromosome_7: 85060-92548 Chlamydomonas reinhardtii
Cre07.g312750 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 85060-90059 Chlamydomonas reinhardtii
Cre07.g312750 10.0kb upstream 10.0kb upstream 12489 true chromosome_7: 90060-102548 Chlamydomonas reinhardtii
Cre07.g312750 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 92549-102548 Chlamydomonas reinhardtii
Cre07.g312750 10.0kb downstream 10.0kb downstream 12489 true chromosome_7: 80060-92548 Chlamydomonas reinhardtii
Cre07.g312750 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 80060-90059 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108767 5260 Chlorophyte View MSA
123423947 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.249     High  
cufflinks 11.037        
cufflinks 8.358        
cufflinks 9.175        
cufflinks 9.546        
cufflinks 11.284        
cufflinks 10.63        
cufflinks 11.233        
cufflinks 9.956        
cufflinks 3.606       Low
cufflinks 8.159        
cufflinks 10.274        
cufflinks 6.1       Low
cufflinks 10.194        
cufflinks 8.672        
cufflinks 14.359     High High
cufflinks 6.846        
cufflinks 7.928        
cufflinks 4.034       Low
cufflinks 9.55        
cufflinks 9.178        
cufflinks 6.658        
cufflinks 7.758        
cufflinks 9.246        
cufflinks 5.919       Low
cufflinks 18.6592 1.95536 35.363   High
cufflinks 18.2755 4.99028 31.5607   High
cufflinks 3.73894 0.0 8.14481   Low
cufflinks 9.89507 1.57471 18.2154   Low
cufflinks 14.2934 2.85342 25.7335    

0 Strain