Gene : TWI1 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g335800 Defline:  (1 of 1) PTHR21083//PTHR21083:SF0 - TWISTER // PROTEIN PIH1D3
Genomic Order:  573 Name:  ? Cre07.g335800
Secondary Identifier:  ? PAC:30774645
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g335800 0.5kb upstream 0.5kb upstream 3412 true chromosome_7: 3492487-3495898 Chlamydomonas reinhardtii
Cre07.g335800 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 3492487-3492986 Chlamydomonas reinhardtii
Cre07.g335800 0.5kb downstream 0.5kb downstream 3412 true chromosome_7: 3492987-3496398 Chlamydomonas reinhardtii
Cre07.g335800 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 3495899-3496398 Chlamydomonas reinhardtii
Cre07.g335800 1.0kb upstream 1.0kb upstream 3912 true chromosome_7: 3491987-3495898 Chlamydomonas reinhardtii
Cre07.g335800 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 3491987-3492986 Chlamydomonas reinhardtii
Cre07.g335800 1.0kb downstream 1.0kb downstream 3912 true chromosome_7: 3492987-3496898 Chlamydomonas reinhardtii
Cre07.g335800 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 3495899-3496898 Chlamydomonas reinhardtii
Cre07.g335800 2.0kb upstream 2.0kb upstream 4912 true chromosome_7: 3490987-3495898 Chlamydomonas reinhardtii
Cre07.g335800 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 3490987-3492986 Chlamydomonas reinhardtii
Cre07.g335800 2.0kb downstream 2.0kb downstream 4912 true chromosome_7: 3492987-3497898 Chlamydomonas reinhardtii
Cre07.g335800 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 3495899-3497898 Chlamydomonas reinhardtii
Cre07.g335800 5.0kb upstream 5.0kb upstream 7912 true chromosome_7: 3487987-3495898 Chlamydomonas reinhardtii
Cre07.g335800 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 3487987-3492986 Chlamydomonas reinhardtii
Cre07.g335800 5.0kb downstream 5.0kb downstream 7912 true chromosome_7: 3492987-3500898 Chlamydomonas reinhardtii
Cre07.g335800 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 3495899-3500898 Chlamydomonas reinhardtii
Cre07.g335800 10.0kb upstream 10.0kb upstream 12912 true chromosome_7: 3482987-3495898 Chlamydomonas reinhardtii
Cre07.g335800 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 3482987-3492986 Chlamydomonas reinhardtii
Cre07.g335800 10.0kb downstream 10.0kb downstream 12912 true chromosome_7: 3492987-3505898 Chlamydomonas reinhardtii
Cre07.g335800 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 3495899-3505898 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108959 5260 Chlorophyte View MSA
123427223 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.632       Low
cufflinks 5.026        
cufflinks 4.95        
cufflinks 5.388       High
cufflinks 3.953        
cufflinks 4.25        
cufflinks 5.009        
cufflinks 5.581       High
cufflinks 1.737       Low
cufflinks 2.858        
cufflinks 4.212        
cufflinks 3.92        
cufflinks 4.063        
cufflinks 4.066        
cufflinks 4.014        
cufflinks 2.152       Low
cufflinks 2.079       Low
cufflinks 3.94        
cufflinks 2.203       Low
cufflinks 5.119        
cufflinks 3.565        
cufflinks 1.987       Low
cufflinks 4.577        
cufflinks 4.734        
cufflinks 2.256       Low
cufflinks 1.93524 0.0682099 3.80227    
cufflinks 3.76257 0.3122 7.21295    
cufflinks 4.01332 0.0 8.66756    
cufflinks 3.43586 0.391535 6.48018    
cufflinks 6.03562 0.978969 11.0923   High

0 Strain