Gene : Cre06.g264050 C. reinhardtii v5.6
Defline:  (1 of 3) PTHR15629 - SH3YL1 PROTEIN Genomic Order:  354
Name:  ? Cre06.g264050 Secondary Identifier:  ? PAC:30779884
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g264050 0.5kb upstream 0.5kb upstream 5326 true chromosome_6: 1985962-1991287 Chlamydomonas reinhardtii
Cre06.g264050 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 1985962-1986461 Chlamydomonas reinhardtii
Cre06.g264050 0.5kb downstream 0.5kb downstream 5326 true chromosome_6: 1986462-1991787 Chlamydomonas reinhardtii
Cre06.g264050 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 1991288-1991787 Chlamydomonas reinhardtii
Cre06.g264050 1.0kb upstream 1.0kb upstream 5826 true chromosome_6: 1985462-1991287 Chlamydomonas reinhardtii
Cre06.g264050 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 1985462-1986461 Chlamydomonas reinhardtii
Cre06.g264050 1.0kb downstream 1.0kb downstream 5826 true chromosome_6: 1986462-1992287 Chlamydomonas reinhardtii
Cre06.g264050 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 1991288-1992287 Chlamydomonas reinhardtii
Cre06.g264050 2.0kb upstream 2.0kb upstream 6826 true chromosome_6: 1984462-1991287 Chlamydomonas reinhardtii
Cre06.g264050 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 1984462-1986461 Chlamydomonas reinhardtii
Cre06.g264050 2.0kb downstream 2.0kb downstream 6826 true chromosome_6: 1986462-1993287 Chlamydomonas reinhardtii
Cre06.g264050 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 1991288-1993287 Chlamydomonas reinhardtii
Cre06.g264050 5.0kb upstream 5.0kb upstream 9826 true chromosome_6: 1981462-1991287 Chlamydomonas reinhardtii
Cre06.g264050 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 1981462-1986461 Chlamydomonas reinhardtii
Cre06.g264050 5.0kb downstream 5.0kb downstream 9826 true chromosome_6: 1986462-1996287 Chlamydomonas reinhardtii
Cre06.g264050 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 1991288-1996287 Chlamydomonas reinhardtii
Cre06.g264050 10.0kb upstream 10.0kb upstream 14826 true chromosome_6: 1976462-1991287 Chlamydomonas reinhardtii
Cre06.g264050 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 1976462-1986461 Chlamydomonas reinhardtii
Cre06.g264050 10.0kb downstream 10.0kb downstream 14826 true chromosome_6: 1986462-2001287 Chlamydomonas reinhardtii
Cre06.g264050 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 1991288-2001287 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098673 5260 Chlorophyte View MSA
123414260 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.861       Low
cufflinks 12.555        
cufflinks 14.675     High  
cufflinks 11.903        
cufflinks 58.459     High High
cufflinks 14.24     High  
cufflinks 10.296        
cufflinks 13.01        
cufflinks 3.122       Low
cufflinks 5.86        
cufflinks 13.368        
cufflinks 12.186        
cufflinks 14.482     High  
cufflinks 15.128     High  
cufflinks 11.31        
cufflinks 6.983        
cufflinks 3.297       Low
cufflinks 9.206        
cufflinks 7.772     High  
cufflinks 10.333        
cufflinks 10.704        
cufflinks 3.603       Low
cufflinks 20.092     High High
cufflinks 13.609        
cufflinks 3.209       Low
cufflinks 12.2147 1.62189 22.8075    
cufflinks 17.7094 4.8281 30.5907    
cufflinks 21.6661 0.0 43.6878    
cufflinks 10.3797 1.49863 19.2608   Low
cufflinks 30.0847 4.52131 55.648 High  

0 Strain