Gene : CAH2 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g223050 Defline:  (1 of 2) PTHR18952:SF104 - CARBONIC ANHYDRASE-RELATED PROTEIN
Genomic Order:  356 Name:  ? Cre04.g223050
Secondary Identifier:  ? PAC:30790982
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-241 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7115 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7117 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWYQT-4429 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g223050 0.5kb upstream 0.5kb upstream 4925 true chromosome_4: 2656608-2661532 Chlamydomonas reinhardtii
Cre04.g223050 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 2661033-2661532 Chlamydomonas reinhardtii
Cre04.g223050 0.5kb downstream 0.5kb downstream 4925 true chromosome_4: 2656108-2661032 Chlamydomonas reinhardtii
Cre04.g223050 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 2656108-2656607 Chlamydomonas reinhardtii
Cre04.g223050 1.0kb upstream 1.0kb upstream 5425 true chromosome_4: 2656608-2662032 Chlamydomonas reinhardtii
Cre04.g223050 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 2661033-2662032 Chlamydomonas reinhardtii
Cre04.g223050 1.0kb downstream 1.0kb downstream 5425 true chromosome_4: 2655608-2661032 Chlamydomonas reinhardtii
Cre04.g223050 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 2655608-2656607 Chlamydomonas reinhardtii
Cre04.g223050 2.0kb upstream 2.0kb upstream 6425 true chromosome_4: 2656608-2663032 Chlamydomonas reinhardtii
Cre04.g223050 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 2661033-2663032 Chlamydomonas reinhardtii
Cre04.g223050 2.0kb downstream 2.0kb downstream 6425 true chromosome_4: 2654608-2661032 Chlamydomonas reinhardtii
Cre04.g223050 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 2654608-2656607 Chlamydomonas reinhardtii
Cre04.g223050 5.0kb upstream 5.0kb upstream 9425 true chromosome_4: 2656608-2666032 Chlamydomonas reinhardtii
Cre04.g223050 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 2661033-2666032 Chlamydomonas reinhardtii
Cre04.g223050 5.0kb downstream 5.0kb downstream 9425 true chromosome_4: 2651608-2661032 Chlamydomonas reinhardtii
Cre04.g223050 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 2651608-2656607 Chlamydomonas reinhardtii
Cre04.g223050 10.0kb upstream 10.0kb upstream 14425 true chromosome_4: 2656608-2671032 Chlamydomonas reinhardtii
Cre04.g223050 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 2661033-2671032 Chlamydomonas reinhardtii
Cre04.g223050 10.0kb downstream 10.0kb downstream 14425 true chromosome_4: 2646608-2661032 Chlamydomonas reinhardtii
Cre04.g223050 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 2646608-2656607 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098916 5260 Chlorophyte View MSA
123414368 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.585     High  
cufflinks 2.523        
cufflinks 20.876     High  
cufflinks 47.568     High  
cufflinks 6.833        
cufflinks 12.718     High  
cufflinks 0.213     Low Low
cufflinks 51.412     High  
cufflinks 12.331     High  
cufflinks 0.807       Low
cufflinks 27.835     High  
cufflinks 39.153     High  
cufflinks 6.564        
cufflinks 1.397        
cufflinks 27.348     High  
cufflinks 6.467        
cufflinks 109.986     High High
cufflinks 30.744     High  
cufflinks 0.121       Low
cufflinks 0.105     Low Low
cufflinks 28.381     High  
cufflinks 92.298     High High
cufflinks 0.98       Low
cufflinks 39.628     High  
cufflinks 136.261     High High
cufflinks 0.29429 0.0 0.64681   Low
cufflinks 30.4206 7.76461 53.0767 High  
cufflinks 16.8125 0.0 33.8414   High
cufflinks 1.86758 0.140829 3.59432    
cufflinks 40.1811 4.57284 75.7894 High  

0 Strain