Gene : CNK4 C. reinhardtii v5.6
Primary Identifier:  ? Cre05.g232750 Defline:  (1 of 1) PTHR24361//PTHR24361:SF311 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED
Genomic Order:  41 Name:  ? Cre05.g232750
Secondary Identifier:  ? PAC:30783053
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g232750 0.5kb upstream 0.5kb upstream 5671 true chromosome_5: 417692-423362 Chlamydomonas reinhardtii
Cre05.g232750 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 422863-423362 Chlamydomonas reinhardtii
Cre05.g232750 0.5kb downstream 0.5kb downstream 5671 true chromosome_5: 417192-422862 Chlamydomonas reinhardtii
Cre05.g232750 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 417192-417691 Chlamydomonas reinhardtii
Cre05.g232750 1.0kb upstream 1.0kb upstream 6171 true chromosome_5: 417692-423862 Chlamydomonas reinhardtii
Cre05.g232750 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 422863-423862 Chlamydomonas reinhardtii
Cre05.g232750 1.0kb downstream 1.0kb downstream 6171 true chromosome_5: 416692-422862 Chlamydomonas reinhardtii
Cre05.g232750 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 416692-417691 Chlamydomonas reinhardtii
Cre05.g232750 2.0kb upstream 2.0kb upstream 7171 true chromosome_5: 417692-424862 Chlamydomonas reinhardtii
Cre05.g232750 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 422863-424862 Chlamydomonas reinhardtii
Cre05.g232750 2.0kb downstream 2.0kb downstream 7171 true chromosome_5: 415692-422862 Chlamydomonas reinhardtii
Cre05.g232750 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 415692-417691 Chlamydomonas reinhardtii
Cre05.g232750 5.0kb upstream 5.0kb upstream 10171 true chromosome_5: 417692-427862 Chlamydomonas reinhardtii
Cre05.g232750 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 422863-427862 Chlamydomonas reinhardtii
Cre05.g232750 5.0kb downstream 5.0kb downstream 10171 true chromosome_5: 412692-422862 Chlamydomonas reinhardtii
Cre05.g232750 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 412692-417691 Chlamydomonas reinhardtii
Cre05.g232750 10.0kb upstream 10.0kb upstream 15171 true chromosome_5: 417692-432862 Chlamydomonas reinhardtii
Cre05.g232750 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 422863-432862 Chlamydomonas reinhardtii
Cre05.g232750 10.0kb downstream 10.0kb downstream 15171 true chromosome_5: 407692-422862 Chlamydomonas reinhardtii
Cre05.g232750 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 407692-417691 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113009 5260 Chlorophyte View MSA
123429169 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.848        
cufflinks 19.126     High  
cufflinks 17.664     High  
cufflinks 19.697     High  
cufflinks 18.005     High  
cufflinks 14.952     High  
cufflinks 17.974     High  
cufflinks 18.165     High  
cufflinks 10.296        
cufflinks 3.932       Low
cufflinks 17.368     High  
cufflinks 16.931     High  
cufflinks 5.266       Low
cufflinks 16.425     High  
cufflinks 13.627     High  
cufflinks 13.104     High  
cufflinks 10.243        
cufflinks 17.094     High  
cufflinks 3.519       Low
cufflinks 15.321     High  
cufflinks 15.671     High  
cufflinks 8.332        
cufflinks 12.086        
cufflinks 15.802     High  
cufflinks 10.242        
cufflinks 21.8785 0.400664 43.3564   Low
cufflinks 26.488 6.32638 46.6497    
cufflinks 26.344 0.0 53.8828    
cufflinks 17.4908 0.697276 34.2844   Low
cufflinks 27.2246 3.2004 51.2489   High

0 Strain