Gene : VPS4 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g079300 Defline:  (1 of 1) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4)
Genomic Order:  152 Name:  ? Cre02.g079300
Secondary Identifier:  ? PAC:30786252
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g079300 0.5kb upstream 0.5kb upstream 5196 true chromosome_2: 876648-881843 Chlamydomonas reinhardtii
Cre02.g079300 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 876648-877147 Chlamydomonas reinhardtii
Cre02.g079300 0.5kb downstream 0.5kb downstream 5196 true chromosome_2: 877148-882343 Chlamydomonas reinhardtii
Cre02.g079300 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 881844-882343 Chlamydomonas reinhardtii
Cre02.g079300 1.0kb upstream 1.0kb upstream 5696 true chromosome_2: 876148-881843 Chlamydomonas reinhardtii
Cre02.g079300 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 876148-877147 Chlamydomonas reinhardtii
Cre02.g079300 1.0kb downstream 1.0kb downstream 5696 true chromosome_2: 877148-882843 Chlamydomonas reinhardtii
Cre02.g079300 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 881844-882843 Chlamydomonas reinhardtii
Cre02.g079300 2.0kb upstream 2.0kb upstream 6696 true chromosome_2: 875148-881843 Chlamydomonas reinhardtii
Cre02.g079300 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 875148-877147 Chlamydomonas reinhardtii
Cre02.g079300 2.0kb downstream 2.0kb downstream 6696 true chromosome_2: 877148-883843 Chlamydomonas reinhardtii
Cre02.g079300 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 881844-883843 Chlamydomonas reinhardtii
Cre02.g079300 5.0kb upstream 5.0kb upstream 9696 true chromosome_2: 872148-881843 Chlamydomonas reinhardtii
Cre02.g079300 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 872148-877147 Chlamydomonas reinhardtii
Cre02.g079300 5.0kb downstream 5.0kb downstream 9696 true chromosome_2: 877148-886843 Chlamydomonas reinhardtii
Cre02.g079300 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 881844-886843 Chlamydomonas reinhardtii
Cre02.g079300 10.0kb upstream 10.0kb upstream 14696 true chromosome_2: 867148-881843 Chlamydomonas reinhardtii
Cre02.g079300 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 867148-877147 Chlamydomonas reinhardtii
Cre02.g079300 10.0kb downstream 10.0kb downstream 14696 true chromosome_2: 877148-891843 Chlamydomonas reinhardtii
Cre02.g079300 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 881844-891843 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109668 5260 Chlorophyte View MSA
123428117 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.418        
cufflinks 11.625        
cufflinks 17.01     High  
cufflinks 15.191        
cufflinks 14.149     High  
cufflinks 12.232        
cufflinks 15.573     High  
cufflinks 14.261        
cufflinks 7.161       Low
cufflinks 10.603     High  
cufflinks 12.783        
cufflinks 14.481     High  
cufflinks 12.591     High  
cufflinks 13.9     High  
cufflinks 9.232        
cufflinks 8.691        
cufflinks 10.219        
cufflinks 22.947     High High
cufflinks 2.952       Low
cufflinks 15.857     High  
cufflinks 9.444        
cufflinks 6.435       Low
cufflinks 15.644     High  
cufflinks 14.532        
cufflinks 7.52        
cufflinks 48.5932 0.0 99.0244 High High
cufflinks 19.5875 5.16008 34.0149    
cufflinks 21.2764 0.0 43.2856    
cufflinks 10.475 1.04976 19.9002   Low
cufflinks 18.5727 2.97932 34.166    

0 Strain