Gene : IFT20 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g089950 Defline:  (1 of 1) K16473 - intraflagellar transport protein 20 (IFT20)
Genomic Order:  382 Name:  ? Cre02.g089950
Secondary Identifier:  ? PAC:30785958
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g089950 0.5kb upstream 0.5kb upstream 1996 true chromosome_2: 2227471-2229466 Chlamydomonas reinhardtii
Cre02.g089950 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 2228967-2229466 Chlamydomonas reinhardtii
Cre02.g089950 0.5kb downstream 0.5kb downstream 1996 true chromosome_2: 2226971-2228966 Chlamydomonas reinhardtii
Cre02.g089950 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 2226971-2227470 Chlamydomonas reinhardtii
Cre02.g089950 1.0kb upstream 1.0kb upstream 2496 true chromosome_2: 2227471-2229966 Chlamydomonas reinhardtii
Cre02.g089950 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 2228967-2229966 Chlamydomonas reinhardtii
Cre02.g089950 1.0kb downstream 1.0kb downstream 2496 true chromosome_2: 2226471-2228966 Chlamydomonas reinhardtii
Cre02.g089950 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 2226471-2227470 Chlamydomonas reinhardtii
Cre02.g089950 2.0kb upstream 2.0kb upstream 3496 true chromosome_2: 2227471-2230966 Chlamydomonas reinhardtii
Cre02.g089950 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 2228967-2230966 Chlamydomonas reinhardtii
Cre02.g089950 2.0kb downstream 2.0kb downstream 3496 true chromosome_2: 2225471-2228966 Chlamydomonas reinhardtii
Cre02.g089950 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 2225471-2227470 Chlamydomonas reinhardtii
Cre02.g089950 5.0kb upstream 5.0kb upstream 6496 true chromosome_2: 2227471-2233966 Chlamydomonas reinhardtii
Cre02.g089950 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 2228967-2233966 Chlamydomonas reinhardtii
Cre02.g089950 5.0kb downstream 5.0kb downstream 6496 true chromosome_2: 2222471-2228966 Chlamydomonas reinhardtii
Cre02.g089950 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 2222471-2227470 Chlamydomonas reinhardtii
Cre02.g089950 10.0kb upstream 10.0kb upstream 11496 true chromosome_2: 2227471-2238966 Chlamydomonas reinhardtii
Cre02.g089950 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 2228967-2238966 Chlamydomonas reinhardtii
Cre02.g089950 10.0kb downstream 10.0kb downstream 11496 true chromosome_2: 2217471-2228966 Chlamydomonas reinhardtii
Cre02.g089950 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 2217471-2227470 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111139 5260 Chlorophyte View MSA
123427227 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.256     High Low
cufflinks 55.391     High  
cufflinks 80.897     High  
cufflinks 97.02     High High
cufflinks 36.975     High  
cufflinks 50.444     High  
cufflinks 37.735     High  
cufflinks 64.55     High  
cufflinks 10.059       Low
cufflinks 89.596     High High
cufflinks 93.872     High High
cufflinks 44.326     High  
cufflinks 40.151     High  
cufflinks 42.693     High  
cufflinks 79.603     High  
cufflinks 15.778     High Low
cufflinks 17.522     High Low
cufflinks 58.054     High  
cufflinks 69.198     High  
cufflinks 52.374     High  
cufflinks 54.729     High  
cufflinks 16.935     High Low
cufflinks 54.391     High  
cufflinks 46.588     High  
cufflinks 8.916       Low
cufflinks 22.1414 2.9457 41.337 High  
cufflinks 26.9221 7.33254 46.5116    
cufflinks 43.8533 0.0 88.619 High  
cufflinks 23.2668 2.87196 43.6615 High  
cufflinks 74.7347 11.3194 138.15 High  

0 Strain