Gene : Cre02.g084750 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR24012//PTHR24012:SF497 - FAMILY NOT NAMED // TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1 Genomic Order:  268
Name:  ? Cre02.g084750 Secondary Identifier:  ? PAC:30784876
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g084750 0.5kb upstream 0.5kb upstream 5183 true chromosome_2: 1556056-1561238 Chlamydomonas reinhardtii
Cre02.g084750 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 1560739-1561238 Chlamydomonas reinhardtii
Cre02.g084750 0.5kb downstream 0.5kb downstream 5183 true chromosome_2: 1555556-1560738 Chlamydomonas reinhardtii
Cre02.g084750 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 1555556-1556055 Chlamydomonas reinhardtii
Cre02.g084750 1.0kb upstream 1.0kb upstream 5683 true chromosome_2: 1556056-1561738 Chlamydomonas reinhardtii
Cre02.g084750 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 1560739-1561738 Chlamydomonas reinhardtii
Cre02.g084750 1.0kb downstream 1.0kb downstream 5683 true chromosome_2: 1555056-1560738 Chlamydomonas reinhardtii
Cre02.g084750 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 1555056-1556055 Chlamydomonas reinhardtii
Cre02.g084750 2.0kb upstream 2.0kb upstream 6683 true chromosome_2: 1556056-1562738 Chlamydomonas reinhardtii
Cre02.g084750 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 1560739-1562738 Chlamydomonas reinhardtii
Cre02.g084750 2.0kb downstream 2.0kb downstream 6683 true chromosome_2: 1554056-1560738 Chlamydomonas reinhardtii
Cre02.g084750 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 1554056-1556055 Chlamydomonas reinhardtii
Cre02.g084750 5.0kb upstream 5.0kb upstream 9683 true chromosome_2: 1556056-1565738 Chlamydomonas reinhardtii
Cre02.g084750 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 1560739-1565738 Chlamydomonas reinhardtii
Cre02.g084750 5.0kb downstream 5.0kb downstream 9683 true chromosome_2: 1551056-1560738 Chlamydomonas reinhardtii
Cre02.g084750 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 1551056-1556055 Chlamydomonas reinhardtii
Cre02.g084750 10.0kb upstream 10.0kb upstream 14683 true chromosome_2: 1556056-1570738 Chlamydomonas reinhardtii
Cre02.g084750 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 1560739-1570738 Chlamydomonas reinhardtii
Cre02.g084750 10.0kb downstream 10.0kb downstream 14683 true chromosome_2: 1546056-1560738 Chlamydomonas reinhardtii
Cre02.g084750 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 1546056-1556055 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094001 5260 Chlorophyte View MSA
123429142 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.917        
cufflinks 3.471        
cufflinks 2.314        
cufflinks 3.851        
cufflinks 2.956        
cufflinks 2.42        
cufflinks 4.153        
cufflinks 3.589        
cufflinks 2.49        
cufflinks 0.482       Low
cufflinks 2.533        
cufflinks 3.497        
cufflinks 0.684       Low
cufflinks 2.609        
cufflinks 2.995        
cufflinks 2.649        
cufflinks 4.21        
cufflinks 2.761        
cufflinks 1.807        
cufflinks 7.456       High
cufflinks 3.45        
cufflinks 3.578        
cufflinks 2.587        
cufflinks 3.265        
cufflinks 4.227        
cufflinks 6.86039 0.0 13.7536   Low
cufflinks 30.3804 6.1769 54.5839 High  
cufflinks 11.0841 0.0 22.2894    
cufflinks 12.6778 0.0 25.3836   High
cufflinks 16.0555 0.200454 31.9105    

0 Strain