Gene : Cre17.g729350 C. reinhardtii v5.6
Defline:  (1 of 25) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  731
Name:  ? Cre17.g729350 Secondary Identifier:  ? PAC:30781809
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g729350 0.5kb upstream 0.5kb upstream 13362 true chromosome_17: 4072496-4085857 Chlamydomonas reinhardtii
Cre17.g729350 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 4072496-4072995 Chlamydomonas reinhardtii
Cre17.g729350 0.5kb downstream 0.5kb downstream 13362 true chromosome_17: 4072996-4086357 Chlamydomonas reinhardtii
Cre17.g729350 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 4085858-4086357 Chlamydomonas reinhardtii
Cre17.g729350 1.0kb upstream 1.0kb upstream 13862 true chromosome_17: 4071996-4085857 Chlamydomonas reinhardtii
Cre17.g729350 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 4071996-4072995 Chlamydomonas reinhardtii
Cre17.g729350 1.0kb downstream 1.0kb downstream 13862 true chromosome_17: 4072996-4086857 Chlamydomonas reinhardtii
Cre17.g729350 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 4085858-4086857 Chlamydomonas reinhardtii
Cre17.g729350 2.0kb upstream 2.0kb upstream 14862 true chromosome_17: 4070996-4085857 Chlamydomonas reinhardtii
Cre17.g729350 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 4070996-4072995 Chlamydomonas reinhardtii
Cre17.g729350 2.0kb downstream 2.0kb downstream 14862 true chromosome_17: 4072996-4087857 Chlamydomonas reinhardtii
Cre17.g729350 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 4085858-4087857 Chlamydomonas reinhardtii
Cre17.g729350 5.0kb upstream 5.0kb upstream 17862 true chromosome_17: 4067996-4085857 Chlamydomonas reinhardtii
Cre17.g729350 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 4067996-4072995 Chlamydomonas reinhardtii
Cre17.g729350 5.0kb downstream 5.0kb downstream 17862 true chromosome_17: 4072996-4090857 Chlamydomonas reinhardtii
Cre17.g729350 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 4085858-4090857 Chlamydomonas reinhardtii
Cre17.g729350 10.0kb upstream 10.0kb upstream 22862 true chromosome_17: 4062996-4085857 Chlamydomonas reinhardtii
Cre17.g729350 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 4062996-4072995 Chlamydomonas reinhardtii
Cre17.g729350 10.0kb downstream 10.0kb downstream 22862 true chromosome_17: 4072996-4095857 Chlamydomonas reinhardtii
Cre17.g729350 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 4085858-4095857 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081623 5260 Chlorophyte View MSA
123399344 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.119        
cufflinks 0.298        
cufflinks 0.051     Low  
cufflinks 0.07     Low  
cufflinks 1.149       High
cufflinks 0.274        
cufflinks 0.667       High
cufflinks 0.099     Low  
cufflinks 0.138        
cufflinks 0.349        
cufflinks 0.015     Low Low
cufflinks 0.196     Low  
cufflinks 0.025     Low Low
cufflinks 0.256        
cufflinks 0.095     Low  
cufflinks 0.308        
cufflinks 0.09     Low  
cufflinks 0.174        
cufflinks 0.279        
cufflinks 0.177        
cufflinks 0.2        
cufflinks 0.051     Low  
cufflinks 0.317        
cufflinks 0.016     Low Low
cufflinks 0.124        
cufflinks 0.774767 0.0704295 1.4791   High
cufflinks 1.49305 0.211451 2.77465    
cufflinks 3.18508 0.0 6.43243   High
cufflinks 2.37704 0.390953 4.36313   High
cufflinks 2.45807 0.472456 4.44367    

0 Strain