Gene : Cre17.g729400 C. reinhardtii v5.6
Defline:  (1 of 25) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  733
Name:  ? Cre17.g729400 Secondary Identifier:  ? PAC:30781634
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g729400 0.5kb upstream 0.5kb upstream 14342 true chromosome_17: 4087016-4101357 Chlamydomonas reinhardtii
Cre17.g729400 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 4087016-4087515 Chlamydomonas reinhardtii
Cre17.g729400 0.5kb downstream 0.5kb downstream 14342 true chromosome_17: 4087516-4101857 Chlamydomonas reinhardtii
Cre17.g729400 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 4101358-4101857 Chlamydomonas reinhardtii
Cre17.g729400 1.0kb upstream 1.0kb upstream 14842 true chromosome_17: 4086516-4101357 Chlamydomonas reinhardtii
Cre17.g729400 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 4086516-4087515 Chlamydomonas reinhardtii
Cre17.g729400 1.0kb downstream 1.0kb downstream 14842 true chromosome_17: 4087516-4102357 Chlamydomonas reinhardtii
Cre17.g729400 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 4101358-4102357 Chlamydomonas reinhardtii
Cre17.g729400 2.0kb upstream 2.0kb upstream 15842 true chromosome_17: 4085516-4101357 Chlamydomonas reinhardtii
Cre17.g729400 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 4085516-4087515 Chlamydomonas reinhardtii
Cre17.g729400 2.0kb downstream 2.0kb downstream 15842 true chromosome_17: 4087516-4103357 Chlamydomonas reinhardtii
Cre17.g729400 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 4101358-4103357 Chlamydomonas reinhardtii
Cre17.g729400 5.0kb upstream 5.0kb upstream 18842 true chromosome_17: 4082516-4101357 Chlamydomonas reinhardtii
Cre17.g729400 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 4082516-4087515 Chlamydomonas reinhardtii
Cre17.g729400 5.0kb downstream 5.0kb downstream 18842 true chromosome_17: 4087516-4106357 Chlamydomonas reinhardtii
Cre17.g729400 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 4101358-4106357 Chlamydomonas reinhardtii
Cre17.g729400 10.0kb upstream 10.0kb upstream 23842 true chromosome_17: 4077516-4101357 Chlamydomonas reinhardtii
Cre17.g729400 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 4077516-4087515 Chlamydomonas reinhardtii
Cre17.g729400 10.0kb downstream 10.0kb downstream 23842 true chromosome_17: 4087516-4111357 Chlamydomonas reinhardtii
Cre17.g729400 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 4101358-4111357 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081623 5260 Chlorophyte View MSA
123399344 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.231        
cufflinks 0.472        
cufflinks 0.228       Low
cufflinks 0.337        
cufflinks 0.368        
cufflinks 0.334        
cufflinks 0.311        
cufflinks 0.374        
cufflinks 0.314        
cufflinks 0.239        
cufflinks 0.505        
cufflinks 1.047       High
cufflinks 0.149       Low
cufflinks 0.444        
cufflinks 0.412        
cufflinks 0.393        
cufflinks 1.0       High
cufflinks 0.254        
cufflinks 0.128       Low
cufflinks 0.295        
cufflinks 0.519        
cufflinks 0.667       High
cufflinks 0.466        
cufflinks 0.662       High
cufflinks 0.735       High
cufflinks 0.140873 0.0 0.300624 Low  
cufflinks 0.981715 0.0766436 1.88679    
cufflinks 3.20475 0.0 6.45258    
cufflinks 0.226955 0.0 0.468973 Low  
cufflinks 2.58748 0.51229 4.66267    

0 Strain