Gene : PHC23 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g705500 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  211 Name:  ? Cre17.g705500
Secondary Identifier:  ? PAC:30781823
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g705500 0.5kb upstream 0.5kb upstream 4503 true chromosome_17: 1274909-1279411 Chlamydomonas reinhardtii
Cre17.g705500 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1274909-1275408 Chlamydomonas reinhardtii
Cre17.g705500 0.5kb downstream 0.5kb downstream 4503 true chromosome_17: 1275409-1279911 Chlamydomonas reinhardtii
Cre17.g705500 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1279412-1279911 Chlamydomonas reinhardtii
Cre17.g705500 1.0kb upstream 1.0kb upstream 5003 true chromosome_17: 1274409-1279411 Chlamydomonas reinhardtii
Cre17.g705500 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1274409-1275408 Chlamydomonas reinhardtii
Cre17.g705500 1.0kb downstream 1.0kb downstream 5003 true chromosome_17: 1275409-1280411 Chlamydomonas reinhardtii
Cre17.g705500 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1279412-1280411 Chlamydomonas reinhardtii
Cre17.g705500 2.0kb upstream 2.0kb upstream 6003 true chromosome_17: 1273409-1279411 Chlamydomonas reinhardtii
Cre17.g705500 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1273409-1275408 Chlamydomonas reinhardtii
Cre17.g705500 2.0kb downstream 2.0kb downstream 6003 true chromosome_17: 1275409-1281411 Chlamydomonas reinhardtii
Cre17.g705500 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1279412-1281411 Chlamydomonas reinhardtii
Cre17.g705500 5.0kb upstream 5.0kb upstream 9003 true chromosome_17: 1270409-1279411 Chlamydomonas reinhardtii
Cre17.g705500 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1270409-1275408 Chlamydomonas reinhardtii
Cre17.g705500 5.0kb downstream 5.0kb downstream 9003 true chromosome_17: 1275409-1284411 Chlamydomonas reinhardtii
Cre17.g705500 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1279412-1284411 Chlamydomonas reinhardtii
Cre17.g705500 10.0kb upstream 10.0kb upstream 14003 true chromosome_17: 1265409-1279411 Chlamydomonas reinhardtii
Cre17.g705500 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1265409-1275408 Chlamydomonas reinhardtii
Cre17.g705500 10.0kb downstream 10.0kb downstream 14003 true chromosome_17: 1275409-1289411 Chlamydomonas reinhardtii
Cre17.g705500 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1279412-1289411 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086753 5260 Chlorophyte View MSA
123404057 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.123        
cufflinks 18.127     High  
cufflinks 13.927        
cufflinks 16.318     High  
cufflinks 9.958        
cufflinks 12.357        
cufflinks 33.212     High High
cufflinks 19.764     High  
cufflinks 0.309       Low
cufflinks 1.563        
cufflinks 13.912        
cufflinks 36.415     High High
cufflinks 3.2        
cufflinks 10.928        
cufflinks 34.357     High High
cufflinks 0.479       Low
cufflinks 0.54       Low
cufflinks 9.919        
cufflinks 0.619       Low
cufflinks 6.761        
cufflinks 15.291     High  
cufflinks 0.191       Low
cufflinks 97.085     High High
cufflinks 9.429        
cufflinks 0.638       Low
cufflinks 11.2205 1.00509 21.4359   Low
cufflinks 20.1807 5.37439 34.9869    
cufflinks 33.4441 0.0 68.6996 High  
cufflinks 18.0968 0.701755 35.4918    
cufflinks 47.5229 2.88673 92.159 High  

0 Strain