Gene : Cre16.g687182 C. reinhardtii v5.6
Genomic Order:  1253 Name:  ? Cre16.g687182
Secondary Identifier:  ? PAC:30777686
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g687182 0.5kb upstream 0.5kb upstream 6650 true chromosome_16: 7482565-7489214 Chlamydomonas reinhardtii
Cre16.g687182 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 7488715-7489214 Chlamydomonas reinhardtii
Cre16.g687182 0.5kb downstream 0.5kb downstream 6650 true chromosome_16: 7482065-7488714 Chlamydomonas reinhardtii
Cre16.g687182 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 7482065-7482564 Chlamydomonas reinhardtii
Cre16.g687182 1.0kb upstream 1.0kb upstream 7150 true chromosome_16: 7482565-7489714 Chlamydomonas reinhardtii
Cre16.g687182 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 7488715-7489714 Chlamydomonas reinhardtii
Cre16.g687182 1.0kb downstream 1.0kb downstream 7150 true chromosome_16: 7481565-7488714 Chlamydomonas reinhardtii
Cre16.g687182 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 7481565-7482564 Chlamydomonas reinhardtii
Cre16.g687182 2.0kb upstream 2.0kb upstream 8150 true chromosome_16: 7482565-7490714 Chlamydomonas reinhardtii
Cre16.g687182 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 7488715-7490714 Chlamydomonas reinhardtii
Cre16.g687182 2.0kb downstream 2.0kb downstream 8150 true chromosome_16: 7480565-7488714 Chlamydomonas reinhardtii
Cre16.g687182 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 7480565-7482564 Chlamydomonas reinhardtii
Cre16.g687182 5.0kb upstream 5.0kb upstream 11150 true chromosome_16: 7482565-7493714 Chlamydomonas reinhardtii
Cre16.g687182 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 7488715-7493714 Chlamydomonas reinhardtii
Cre16.g687182 5.0kb downstream 5.0kb downstream 11150 true chromosome_16: 7477565-7488714 Chlamydomonas reinhardtii
Cre16.g687182 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 7477565-7482564 Chlamydomonas reinhardtii
Cre16.g687182 10.0kb upstream 10.0kb upstream 16150 true chromosome_16: 7482565-7498714 Chlamydomonas reinhardtii
Cre16.g687182 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 7488715-7498714 Chlamydomonas reinhardtii
Cre16.g687182 10.0kb downstream 10.0kb downstream 16150 true chromosome_16: 7472565-7488714 Chlamydomonas reinhardtii
Cre16.g687182 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 7472565-7482564 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094065 5260 Chlorophyte View MSA
123411015 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.597       Low
cufflinks 5.583        
cufflinks 4.251        
cufflinks 7.534       High
cufflinks 3.871        
cufflinks 4.777        
cufflinks 2.733        
cufflinks 5.551        
cufflinks 0.66       Low
cufflinks 2.559        
cufflinks 4.742        
cufflinks 3.825        
cufflinks 2.271        
cufflinks 5.251        
cufflinks 4.434        
cufflinks 1.284        
cufflinks 1.149        
cufflinks 4.391        
cufflinks 0.132       Low
cufflinks 1.194        
cufflinks 4.94        
cufflinks 0.709       Low
cufflinks 2.701        
cufflinks 2.892        
cufflinks 0.654       Low
cufflinks 2.90366 0.469268 5.33806   Low
cufflinks 9.3919 2.56503 16.2188    
cufflinks 23.8741 0.0 48.7432   High
cufflinks 4.42537 0.732316 8.11843    
cufflinks 15.337 2.54044 28.1337    

0 Strain