Gene : Cre16.g680232 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR12509//PTHR12509:SF8 - SPERMATOGENESIS-ASSOCIATED 4-RELATED // SPERMATOGENESIS-ASSOCIATED PROTEIN 4 Genomic Order:  579
Name:  ? Cre16.g680232 Secondary Identifier:  ? PAC:30777675
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g680232 0.5kb upstream 0.5kb upstream 4741 true chromosome_16: 3558316-3563056 Chlamydomonas reinhardtii
Cre16.g680232 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 3558316-3558815 Chlamydomonas reinhardtii
Cre16.g680232 0.5kb downstream 0.5kb downstream 4741 true chromosome_16: 3558816-3563556 Chlamydomonas reinhardtii
Cre16.g680232 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 3563057-3563556 Chlamydomonas reinhardtii
Cre16.g680232 1.0kb upstream 1.0kb upstream 5241 true chromosome_16: 3557816-3563056 Chlamydomonas reinhardtii
Cre16.g680232 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 3557816-3558815 Chlamydomonas reinhardtii
Cre16.g680232 1.0kb downstream 1.0kb downstream 5241 true chromosome_16: 3558816-3564056 Chlamydomonas reinhardtii
Cre16.g680232 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 3563057-3564056 Chlamydomonas reinhardtii
Cre16.g680232 2.0kb upstream 2.0kb upstream 6241 true chromosome_16: 3556816-3563056 Chlamydomonas reinhardtii
Cre16.g680232 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 3556816-3558815 Chlamydomonas reinhardtii
Cre16.g680232 2.0kb downstream 2.0kb downstream 6241 true chromosome_16: 3558816-3565056 Chlamydomonas reinhardtii
Cre16.g680232 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 3563057-3565056 Chlamydomonas reinhardtii
Cre16.g680232 5.0kb upstream 5.0kb upstream 9241 true chromosome_16: 3553816-3563056 Chlamydomonas reinhardtii
Cre16.g680232 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 3553816-3558815 Chlamydomonas reinhardtii
Cre16.g680232 5.0kb downstream 5.0kb downstream 9241 true chromosome_16: 3558816-3568056 Chlamydomonas reinhardtii
Cre16.g680232 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 3563057-3568056 Chlamydomonas reinhardtii
Cre16.g680232 10.0kb upstream 10.0kb upstream 14241 true chromosome_16: 3548816-3563056 Chlamydomonas reinhardtii
Cre16.g680232 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 3548816-3558815 Chlamydomonas reinhardtii
Cre16.g680232 10.0kb downstream 10.0kb downstream 14241 true chromosome_16: 3558816-3573056 Chlamydomonas reinhardtii
Cre16.g680232 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 3563057-3573056 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110880 5260 Chlorophyte View MSA
123423161 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.764        
cufflinks 1.014        
cufflinks 1.448        
cufflinks 1.67        
cufflinks 0.863        
cufflinks 1.05        
cufflinks 1.211        
cufflinks 1.437        
cufflinks 1.139        
cufflinks 0.322       Low
cufflinks 3.505       High
cufflinks 1.233        
cufflinks 0.669        
cufflinks 0.987        
cufflinks 1.05        
cufflinks 1.459        
cufflinks 1.005        
cufflinks 1.123        
cufflinks 0.241       Low
cufflinks 1.552        
cufflinks 0.989        
cufflinks 0.936        
cufflinks 1.22        
cufflinks 1.625        
cufflinks 0.924        
cufflinks 4.60331 0.776616 8.43001   Low
cufflinks 2.48257 0.0824707 4.88267    
cufflinks 2.50551 0.0 5.533    
cufflinks 1.6715 0.116464 3.22654   Low
cufflinks 3.6782 0.504539 6.85187   High

0 Strain