Gene : NCP1 C. reinhardtii v5.6
Primary Identifier:  ? Cre14.g623300 Defline:  (1 of 1) 4.1.3.44 - tRNA 4-demethylwyosine synthase (AdoMet-dependent)
Genomic Order:  352 Name:  ? Cre14.g623300
Secondary Identifier:  ? PAC:30776583
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-7283 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7286 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre14.g623300 0.5kb upstream 0.5kb upstream 10066 true chromosome_14: 2277524-2287589 Chlamydomonas reinhardtii
Cre14.g623300 0.5kb upstream 0.5kb upstream 500 false chromosome_14: 2287090-2287589 Chlamydomonas reinhardtii
Cre14.g623300 0.5kb downstream 0.5kb downstream 10066 true chromosome_14: 2277024-2287089 Chlamydomonas reinhardtii
Cre14.g623300 0.5kb downstream 0.5kb downstream 500 false chromosome_14: 2277024-2277523 Chlamydomonas reinhardtii
Cre14.g623300 1.0kb upstream 1.0kb upstream 10566 true chromosome_14: 2277524-2288089 Chlamydomonas reinhardtii
Cre14.g623300 1.0kb upstream 1.0kb upstream 1000 false chromosome_14: 2287090-2288089 Chlamydomonas reinhardtii
Cre14.g623300 1.0kb downstream 1.0kb downstream 10566 true chromosome_14: 2276524-2287089 Chlamydomonas reinhardtii
Cre14.g623300 1.0kb downstream 1.0kb downstream 1000 false chromosome_14: 2276524-2277523 Chlamydomonas reinhardtii
Cre14.g623300 2.0kb upstream 2.0kb upstream 11566 true chromosome_14: 2277524-2289089 Chlamydomonas reinhardtii
Cre14.g623300 2.0kb upstream 2.0kb upstream 2000 false chromosome_14: 2287090-2289089 Chlamydomonas reinhardtii
Cre14.g623300 2.0kb downstream 2.0kb downstream 11566 true chromosome_14: 2275524-2287089 Chlamydomonas reinhardtii
Cre14.g623300 2.0kb downstream 2.0kb downstream 2000 false chromosome_14: 2275524-2277523 Chlamydomonas reinhardtii
Cre14.g623300 5.0kb upstream 5.0kb upstream 14566 true chromosome_14: 2277524-2292089 Chlamydomonas reinhardtii
Cre14.g623300 5.0kb upstream 5.0kb upstream 5000 false chromosome_14: 2287090-2292089 Chlamydomonas reinhardtii
Cre14.g623300 5.0kb downstream 5.0kb downstream 14566 true chromosome_14: 2272524-2287089 Chlamydomonas reinhardtii
Cre14.g623300 5.0kb downstream 5.0kb downstream 5000 false chromosome_14: 2272524-2277523 Chlamydomonas reinhardtii
Cre14.g623300 10.0kb upstream 10.0kb upstream 19566 true chromosome_14: 2277524-2297089 Chlamydomonas reinhardtii
Cre14.g623300 10.0kb upstream 10.0kb upstream 10000 false chromosome_14: 2287090-2297089 Chlamydomonas reinhardtii
Cre14.g623300 10.0kb downstream 10.0kb downstream 19566 true chromosome_14: 2267524-2287089 Chlamydomonas reinhardtii
Cre14.g623300 10.0kb downstream 10.0kb downstream 10000 false chromosome_14: 2267524-2277523 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109678 5260 Chlorophyte View MSA
123426537 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.044        
cufflinks 1.253        
cufflinks 1.916        
cufflinks 1.061        
cufflinks 1.495        
cufflinks 1.742        
cufflinks 1.498        
cufflinks 1.546        
cufflinks 1.731        
cufflinks 1.416        
cufflinks 0.212       Low
cufflinks 1.662        
cufflinks 1.67        
cufflinks 0.492       Low
cufflinks 1.64        
cufflinks 1.44        
cufflinks 1.762        
cufflinks 0.924        
cufflinks 1.186        
cufflinks 0.395       Low
cufflinks 1.639        
cufflinks 1.71        
cufflinks 1.027        
cufflinks 1.635        
cufflinks 0.99        
cufflinks 8.85834 1.01904 16.6976   High
cufflinks 21.9799 5.57462 38.3852   High
cufflinks 1.26134 0.0 2.95641   Low
cufflinks 7.25372 0.986015 13.5214    
cufflinks 8.33529 1.63731 15.0333    

0 Strain