Gene : VSP7 C. reinhardtii v5.6
Primary Identifier:  ? Cre14.g631350 Defline:  (1 of 7) PTHR11339//PTHR11339:SF290 - EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED // PROTEIN T26A8.1
Genomic Order:  541 Name:  ? Cre14.g631350
Secondary Identifier:  ? PAC:30776615
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre14.g631350 0.5kb upstream 0.5kb upstream 8872 true chromosome_14: 3639679-3648550 Chlamydomonas reinhardtii
Cre14.g631350 0.5kb upstream 0.5kb upstream 500 false chromosome_14: 3639679-3640178 Chlamydomonas reinhardtii
Cre14.g631350 0.5kb downstream 0.5kb downstream 8872 true chromosome_14: 3640179-3649050 Chlamydomonas reinhardtii
Cre14.g631350 0.5kb downstream 0.5kb downstream 500 false chromosome_14: 3648551-3649050 Chlamydomonas reinhardtii
Cre14.g631350 1.0kb upstream 1.0kb upstream 9372 true chromosome_14: 3639179-3648550 Chlamydomonas reinhardtii
Cre14.g631350 1.0kb upstream 1.0kb upstream 1000 false chromosome_14: 3639179-3640178 Chlamydomonas reinhardtii
Cre14.g631350 1.0kb downstream 1.0kb downstream 9372 true chromosome_14: 3640179-3649550 Chlamydomonas reinhardtii
Cre14.g631350 1.0kb downstream 1.0kb downstream 1000 false chromosome_14: 3648551-3649550 Chlamydomonas reinhardtii
Cre14.g631350 2.0kb upstream 2.0kb upstream 10372 true chromosome_14: 3638179-3648550 Chlamydomonas reinhardtii
Cre14.g631350 2.0kb upstream 2.0kb upstream 2000 false chromosome_14: 3638179-3640178 Chlamydomonas reinhardtii
Cre14.g631350 2.0kb downstream 2.0kb downstream 10372 true chromosome_14: 3640179-3650550 Chlamydomonas reinhardtii
Cre14.g631350 2.0kb downstream 2.0kb downstream 2000 false chromosome_14: 3648551-3650550 Chlamydomonas reinhardtii
Cre14.g631350 5.0kb upstream 5.0kb upstream 13372 true chromosome_14: 3635179-3648550 Chlamydomonas reinhardtii
Cre14.g631350 5.0kb upstream 5.0kb upstream 5000 false chromosome_14: 3635179-3640178 Chlamydomonas reinhardtii
Cre14.g631350 5.0kb downstream 5.0kb downstream 13372 true chromosome_14: 3640179-3653550 Chlamydomonas reinhardtii
Cre14.g631350 5.0kb downstream 5.0kb downstream 5000 false chromosome_14: 3648551-3653550 Chlamydomonas reinhardtii
Cre14.g631350 10.0kb upstream 10.0kb upstream 18372 true chromosome_14: 3630179-3648550 Chlamydomonas reinhardtii
Cre14.g631350 10.0kb upstream 10.0kb upstream 10000 false chromosome_14: 3630179-3640178 Chlamydomonas reinhardtii
Cre14.g631350 10.0kb downstream 10.0kb downstream 18372 true chromosome_14: 3640179-3658550 Chlamydomonas reinhardtii
Cre14.g631350 10.0kb downstream 10.0kb downstream 10000 false chromosome_14: 3648551-3658550 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081432 5260 Chlorophyte View MSA
123399162 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.267       Low
cufflinks 0.572        
cufflinks 0.718        
cufflinks 1.14       High
cufflinks 0.535        
cufflinks 0.89        
cufflinks 0.857        
cufflinks 1.409       High
cufflinks 0.346       Low
cufflinks 0.196       Low
cufflinks 1.255       High
cufflinks 0.98        
cufflinks 0.374       Low
cufflinks 0.987        
cufflinks 0.447        
cufflinks 0.503        
cufflinks 0.818        
cufflinks 0.88        
cufflinks 0.263       Low
cufflinks 0.715        
cufflinks 0.547        
cufflinks 0.723        
cufflinks 0.886        
cufflinks 1.472       High
cufflinks 0.594        
cufflinks 1.65908 0.181808 3.13634   Low
cufflinks 2.77597 0.399359 5.15258    
cufflinks 8.27987 0.0 16.6399   High
cufflinks 2.98868 0.496683 5.48068    
cufflinks 13.8639 2.20982 25.518    

0 Strain