Gene : CTL3 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g552300 Defline:  (1 of 2) PF00059//PF12499 - Lectin C-type domain (Lectin_C) // Pherophorin (DUF3707)
Genomic Order:  1453 Name:  ? Cre12.g552300
Secondary Identifier:  ? PAC:30793596
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g552300 0.5kb upstream 0.5kb upstream 7238 true chromosome_12: 7944259-7951496 Chlamydomonas reinhardtii
Cre12.g552300 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 7944259-7944758 Chlamydomonas reinhardtii
Cre12.g552300 0.5kb downstream 0.5kb downstream 7238 true chromosome_12: 7944759-7951996 Chlamydomonas reinhardtii
Cre12.g552300 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 7951497-7951996 Chlamydomonas reinhardtii
Cre12.g552300 1.0kb upstream 1.0kb upstream 7738 true chromosome_12: 7943759-7951496 Chlamydomonas reinhardtii
Cre12.g552300 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 7943759-7944758 Chlamydomonas reinhardtii
Cre12.g552300 1.0kb downstream 1.0kb downstream 7738 true chromosome_12: 7944759-7952496 Chlamydomonas reinhardtii
Cre12.g552300 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 7951497-7952496 Chlamydomonas reinhardtii
Cre12.g552300 2.0kb upstream 2.0kb upstream 8738 true chromosome_12: 7942759-7951496 Chlamydomonas reinhardtii
Cre12.g552300 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 7942759-7944758 Chlamydomonas reinhardtii
Cre12.g552300 2.0kb downstream 2.0kb downstream 8738 true chromosome_12: 7944759-7953496 Chlamydomonas reinhardtii
Cre12.g552300 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 7951497-7953496 Chlamydomonas reinhardtii
Cre12.g552300 5.0kb upstream 5.0kb upstream 11738 true chromosome_12: 7939759-7951496 Chlamydomonas reinhardtii
Cre12.g552300 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 7939759-7944758 Chlamydomonas reinhardtii
Cre12.g552300 5.0kb downstream 5.0kb downstream 11738 true chromosome_12: 7944759-7956496 Chlamydomonas reinhardtii
Cre12.g552300 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 7951497-7956496 Chlamydomonas reinhardtii
Cre12.g552300 10.0kb upstream 10.0kb upstream 16738 true chromosome_12: 7934759-7951496 Chlamydomonas reinhardtii
Cre12.g552300 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 7934759-7944758 Chlamydomonas reinhardtii
Cre12.g552300 10.0kb downstream 10.0kb downstream 16738 true chromosome_12: 7944759-7961496 Chlamydomonas reinhardtii
Cre12.g552300 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 7951497-7961496 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080488 5260 Chlorophyte View MSA
123398269 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.545        
cufflinks 0.536        
cufflinks 2.409        
cufflinks 1.074        
cufflinks 0.734        
cufflinks 2.216        
cufflinks 1.95        
cufflinks 1.074        
cufflinks 0.966        
cufflinks 0.328       Low
cufflinks 1.353        
cufflinks 4.66       High
cufflinks 5.273       High
cufflinks 6.81       High
cufflinks 0.829        
cufflinks 2.147        
cufflinks 0.898        
cufflinks 1.705        
cufflinks 0.035     Low Low
cufflinks 3.2        
cufflinks 0.946        
cufflinks 0.254       Low
cufflinks 2.609        
cufflinks 1.101        
cufflinks 0.247       Low
cufflinks 1.68557 0.123089 3.24806   Low
cufflinks 6.66299 1.65844 11.6675    
cufflinks 19.0289 0.0 38.4287    
cufflinks 3.76493 0.610693 6.91917    
cufflinks 56.7497 3.74987 109.749 High  

0 Strain