Gene : PHC74 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g551977 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  1766 Name:  ? Cre12.g551977
Secondary Identifier:  ? PAC:30792239
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g551977 0.5kb upstream 0.5kb upstream 4688 true chromosome_12: 9631660-9636347 Chlamydomonas reinhardtii
Cre12.g551977 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 9635848-9636347 Chlamydomonas reinhardtii
Cre12.g551977 0.5kb downstream 0.5kb downstream 4688 true chromosome_12: 9631160-9635847 Chlamydomonas reinhardtii
Cre12.g551977 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 9631160-9631659 Chlamydomonas reinhardtii
Cre12.g551977 1.0kb upstream 1.0kb upstream 5188 true chromosome_12: 9631660-9636847 Chlamydomonas reinhardtii
Cre12.g551977 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 9635848-9636847 Chlamydomonas reinhardtii
Cre12.g551977 1.0kb downstream 1.0kb downstream 5188 true chromosome_12: 9630660-9635847 Chlamydomonas reinhardtii
Cre12.g551977 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 9630660-9631659 Chlamydomonas reinhardtii
Cre12.g551977 2.0kb upstream 2.0kb upstream 6188 true chromosome_12: 9631660-9637847 Chlamydomonas reinhardtii
Cre12.g551977 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 9635848-9637847 Chlamydomonas reinhardtii
Cre12.g551977 2.0kb downstream 2.0kb downstream 6188 true chromosome_12: 9629660-9635847 Chlamydomonas reinhardtii
Cre12.g551977 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 9629660-9631659 Chlamydomonas reinhardtii
Cre12.g551977 5.0kb upstream 5.0kb upstream 9188 true chromosome_12: 9631660-9640847 Chlamydomonas reinhardtii
Cre12.g551977 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 9635848-9640847 Chlamydomonas reinhardtii
Cre12.g551977 5.0kb downstream 5.0kb downstream 9188 true chromosome_12: 9626660-9635847 Chlamydomonas reinhardtii
Cre12.g551977 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 9626660-9631659 Chlamydomonas reinhardtii
Cre12.g551977 10.0kb upstream 10.0kb upstream 14188 true chromosome_12: 9631660-9645847 Chlamydomonas reinhardtii
Cre12.g551977 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 9635848-9645847 Chlamydomonas reinhardtii
Cre12.g551977 10.0kb downstream 10.0kb downstream 14188 true chromosome_12: 9621660-9635847 Chlamydomonas reinhardtii
Cre12.g551977 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 9621660-9631659 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085270 5260 Chlorophyte View MSA
123402753 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 0.179     Low  
cufflinks 0.072     Low  
cufflinks 0.046     Low  
cufflinks 0.043     Low  
cufflinks 0.205        
cufflinks 0.297       High
cufflinks 0.27       High
cufflinks 0.003     Low Low
cufflinks 0.035     Low  
cufflinks 0.011     Low Low
cufflinks 0.182     Low  
cufflinks 0.126        
cufflinks 0.094     Low  
cufflinks 0.111     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.089     Low  
cufflinks 0.005     Low Low
cufflinks 0.05     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.721       High
cufflinks 0.198     Low  
cufflinks 0.013     Low Low
cufflinks 0.0722594 0.0 0.182702 Low Low
cufflinks 0.318442 0.0 0.825362 Low  
cufflinks 0.595396 0.0 1.58958    
cufflinks 0.319324 0.0 0.690945    
cufflinks 0.239068 0.0 0.590332 Low  

0 Strain