Gene : TRN1 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g520550 Defline:  (1 of 1) K18752 - transportin-1 (TNPO1)
Genomic Order:  810 Name:  ? Cre12.g520550
Secondary Identifier:  ? PAC:30791733
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g520550 0.5kb upstream 0.5kb upstream 6508 true chromosome_12: 4386058-4392565 Chlamydomonas reinhardtii
Cre12.g520550 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 4386058-4386557 Chlamydomonas reinhardtii
Cre12.g520550 0.5kb downstream 0.5kb downstream 6508 true chromosome_12: 4386558-4393065 Chlamydomonas reinhardtii
Cre12.g520550 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 4392566-4393065 Chlamydomonas reinhardtii
Cre12.g520550 1.0kb upstream 1.0kb upstream 7008 true chromosome_12: 4385558-4392565 Chlamydomonas reinhardtii
Cre12.g520550 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 4385558-4386557 Chlamydomonas reinhardtii
Cre12.g520550 1.0kb downstream 1.0kb downstream 7008 true chromosome_12: 4386558-4393565 Chlamydomonas reinhardtii
Cre12.g520550 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 4392566-4393565 Chlamydomonas reinhardtii
Cre12.g520550 2.0kb upstream 2.0kb upstream 8008 true chromosome_12: 4384558-4392565 Chlamydomonas reinhardtii
Cre12.g520550 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 4384558-4386557 Chlamydomonas reinhardtii
Cre12.g520550 2.0kb downstream 2.0kb downstream 8008 true chromosome_12: 4386558-4394565 Chlamydomonas reinhardtii
Cre12.g520550 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 4392566-4394565 Chlamydomonas reinhardtii
Cre12.g520550 5.0kb upstream 5.0kb upstream 11008 true chromosome_12: 4381558-4392565 Chlamydomonas reinhardtii
Cre12.g520550 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 4381558-4386557 Chlamydomonas reinhardtii
Cre12.g520550 5.0kb downstream 5.0kb downstream 11008 true chromosome_12: 4386558-4397565 Chlamydomonas reinhardtii
Cre12.g520550 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 4392566-4397565 Chlamydomonas reinhardtii
Cre12.g520550 10.0kb upstream 10.0kb upstream 16008 true chromosome_12: 4376558-4392565 Chlamydomonas reinhardtii
Cre12.g520550 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 4376558-4386557 Chlamydomonas reinhardtii
Cre12.g520550 10.0kb downstream 10.0kb downstream 16008 true chromosome_12: 4386558-4402565 Chlamydomonas reinhardtii
Cre12.g520550 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 4392566-4402565 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109669 5260 Chlorophyte View MSA
123426345 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.412        
cufflinks 3.848       High
cufflinks 2.578        
cufflinks 2.237        
cufflinks 2.937        
cufflinks 3.019        
cufflinks 2.965        
cufflinks 3.213        
cufflinks 2.717        
cufflinks 1.115       Low
cufflinks 2.089        
cufflinks 2.578        
cufflinks 2.079        
cufflinks 3.26        
cufflinks 1.884        
cufflinks 3.021        
cufflinks 1.514        
cufflinks 2.324        
cufflinks 0.544       Low
cufflinks 2.075        
cufflinks 2.295        
cufflinks 1.607        
cufflinks 2.98        
cufflinks 2.536        
cufflinks 1.959        
cufflinks 19.0432 0.699549 37.3869   High
cufflinks 11.5607 3.15493 19.9665    
cufflinks 9.43222 0.0 18.958    
cufflinks 8.09412 0.991876 15.1964   Low
cufflinks 13.0305 2.33573 23.7252   High

0 Strain