Gene : CYN20-3 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g495951 Defline:  (1 of 5) K03768 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] (PPIB, ppiB)
Genomic Order:  139 Name:  ? Cre12.g495951
Secondary Identifier:  ? PAC:30792446
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g495951 0.5kb upstream 0.5kb upstream 6473 true chromosome_12: 819122-825594 Chlamydomonas reinhardtii
Cre12.g495951 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 819122-819621 Chlamydomonas reinhardtii
Cre12.g495951 0.5kb downstream 0.5kb downstream 6473 true chromosome_12: 819622-826094 Chlamydomonas reinhardtii
Cre12.g495951 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 825595-826094 Chlamydomonas reinhardtii
Cre12.g495951 1.0kb upstream 1.0kb upstream 6973 true chromosome_12: 818622-825594 Chlamydomonas reinhardtii
Cre12.g495951 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 818622-819621 Chlamydomonas reinhardtii
Cre12.g495951 1.0kb downstream 1.0kb downstream 6973 true chromosome_12: 819622-826594 Chlamydomonas reinhardtii
Cre12.g495951 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 825595-826594 Chlamydomonas reinhardtii
Cre12.g495951 2.0kb upstream 2.0kb upstream 7973 true chromosome_12: 817622-825594 Chlamydomonas reinhardtii
Cre12.g495951 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 817622-819621 Chlamydomonas reinhardtii
Cre12.g495951 2.0kb downstream 2.0kb downstream 7973 true chromosome_12: 819622-827594 Chlamydomonas reinhardtii
Cre12.g495951 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 825595-827594 Chlamydomonas reinhardtii
Cre12.g495951 5.0kb upstream 5.0kb upstream 10973 true chromosome_12: 814622-825594 Chlamydomonas reinhardtii
Cre12.g495951 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 814622-819621 Chlamydomonas reinhardtii
Cre12.g495951 5.0kb downstream 5.0kb downstream 10973 true chromosome_12: 819622-830594 Chlamydomonas reinhardtii
Cre12.g495951 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 825595-830594 Chlamydomonas reinhardtii
Cre12.g495951 10.0kb upstream 10.0kb upstream 15973 true chromosome_12: 809622-825594 Chlamydomonas reinhardtii
Cre12.g495951 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 809622-819621 Chlamydomonas reinhardtii
Cre12.g495951 10.0kb downstream 10.0kb downstream 15973 true chromosome_12: 819622-835594 Chlamydomonas reinhardtii
Cre12.g495951 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 825595-835594 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112771 5260 Chlorophyte View MSA
123428973 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.92     High  
cufflinks 27.131     High  
cufflinks 25.083     High  
cufflinks 13.219        
cufflinks 25.071     High  
cufflinks 29.488     High  
cufflinks 23.11     High  
cufflinks 16.695     High  
cufflinks 27.846     High  
cufflinks 43.78     High High
cufflinks 9.63        
cufflinks 12.969        
cufflinks 32.328     High High
cufflinks 28.266     High  
cufflinks 12.971     High  
cufflinks 23.507     High  
cufflinks 7.464       Low
cufflinks 23.539     High  
cufflinks 14.737     High  
cufflinks 4.065       Low
cufflinks 16.378     High  
cufflinks 5.282       Low
cufflinks 14.522     High  
cufflinks 11.673        
cufflinks 5.779       Low
cufflinks 227.117 0.0 629.891 High Low
cufflinks 254.661 4.20303 505.119 High  
cufflinks 47.6138 0.0 138.1 High  
cufflinks 190.188 0.0 451.907 High Low
cufflinks 453.168 0.0 989.917 High  

0 Strain