Gene : Cre12.g515400 C. reinhardtii v5.6
Defline:  (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) Genomic Order:  700
Name:  ? Cre12.g515400 Secondary Identifier:  ? PAC:30792714
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g515400 0.5kb upstream 0.5kb upstream 16550 true chromosome_12: 3820782-3837331 Chlamydomonas reinhardtii
Cre12.g515400 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3836832-3837331 Chlamydomonas reinhardtii
Cre12.g515400 0.5kb downstream 0.5kb downstream 16550 true chromosome_12: 3820282-3836831 Chlamydomonas reinhardtii
Cre12.g515400 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3820282-3820781 Chlamydomonas reinhardtii
Cre12.g515400 1.0kb upstream 1.0kb upstream 17050 true chromosome_12: 3820782-3837831 Chlamydomonas reinhardtii
Cre12.g515400 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3836832-3837831 Chlamydomonas reinhardtii
Cre12.g515400 1.0kb downstream 1.0kb downstream 17050 true chromosome_12: 3819782-3836831 Chlamydomonas reinhardtii
Cre12.g515400 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3819782-3820781 Chlamydomonas reinhardtii
Cre12.g515400 2.0kb upstream 2.0kb upstream 18050 true chromosome_12: 3820782-3838831 Chlamydomonas reinhardtii
Cre12.g515400 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3836832-3838831 Chlamydomonas reinhardtii
Cre12.g515400 2.0kb downstream 2.0kb downstream 18050 true chromosome_12: 3818782-3836831 Chlamydomonas reinhardtii
Cre12.g515400 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3818782-3820781 Chlamydomonas reinhardtii
Cre12.g515400 5.0kb upstream 5.0kb upstream 21050 true chromosome_12: 3820782-3841831 Chlamydomonas reinhardtii
Cre12.g515400 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3836832-3841831 Chlamydomonas reinhardtii
Cre12.g515400 5.0kb downstream 5.0kb downstream 21050 true chromosome_12: 3815782-3836831 Chlamydomonas reinhardtii
Cre12.g515400 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3815782-3820781 Chlamydomonas reinhardtii
Cre12.g515400 10.0kb upstream 10.0kb upstream 26050 true chromosome_12: 3820782-3846831 Chlamydomonas reinhardtii
Cre12.g515400 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3836832-3846831 Chlamydomonas reinhardtii
Cre12.g515400 10.0kb downstream 10.0kb downstream 26050 true chromosome_12: 3810782-3836831 Chlamydomonas reinhardtii
Cre12.g515400 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3810782-3820781 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081564 5260 Chlorophyte View MSA
123399286 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.18        
cufflinks 0.084     Low  
cufflinks 1.058        
cufflinks 1.52       High
cufflinks 0.077     Low  
cufflinks 0.123     Low  
cufflinks 0.032     Low Low
cufflinks 1.559       High
cufflinks 0.525        
cufflinks 0.014     Low Low
cufflinks 4.919       High
cufflinks 1.014        
cufflinks 0.375        
cufflinks 0.197        
cufflinks 0.905        
cufflinks 0.18        
cufflinks 0.337        
cufflinks 0.334        
cufflinks 0.009     Low Low
cufflinks 0.077     Low  
cufflinks 0.993        
cufflinks 0.09     Low  
cufflinks 0.095     Low  
cufflinks 3.075       High
cufflinks 0.443        
cufflinks 0.0886523 0.0 0.189809 Low  
cufflinks 0.121193 0.0 0.302445 Low  
cufflinks 0.111869 0.0 0.316453 Low  
cufflinks 0.103154 0.0 0.218793 Low  
cufflinks 0.270425 0.0 0.557622 Low  

0 Strain