Gene : Cre11.g467734 C. reinhardtii v5.6
Defline:  (1 of 1) PF00077 - Retroviral aspartyl protease (RVP) Genomic Order:  208
Name:  ? Cre11.g467734 Secondary Identifier:  ? PAC:30775767
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g467734 0.5kb upstream 0.5kb upstream 2454 true chromosome_11: 1449637-1452090 Chlamydomonas reinhardtii
Cre11.g467734 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 1449637-1450136 Chlamydomonas reinhardtii
Cre11.g467734 0.5kb downstream 0.5kb downstream 2454 true chromosome_11: 1450137-1452590 Chlamydomonas reinhardtii
Cre11.g467734 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 1452091-1452590 Chlamydomonas reinhardtii
Cre11.g467734 1.0kb upstream 1.0kb upstream 2954 true chromosome_11: 1449137-1452090 Chlamydomonas reinhardtii
Cre11.g467734 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 1449137-1450136 Chlamydomonas reinhardtii
Cre11.g467734 1.0kb downstream 1.0kb downstream 2954 true chromosome_11: 1450137-1453090 Chlamydomonas reinhardtii
Cre11.g467734 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 1452091-1453090 Chlamydomonas reinhardtii
Cre11.g467734 2.0kb upstream 2.0kb upstream 3954 true chromosome_11: 1448137-1452090 Chlamydomonas reinhardtii
Cre11.g467734 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 1448137-1450136 Chlamydomonas reinhardtii
Cre11.g467734 2.0kb downstream 2.0kb downstream 3954 true chromosome_11: 1450137-1454090 Chlamydomonas reinhardtii
Cre11.g467734 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 1452091-1454090 Chlamydomonas reinhardtii
Cre11.g467734 5.0kb upstream 5.0kb upstream 6954 true chromosome_11: 1445137-1452090 Chlamydomonas reinhardtii
Cre11.g467734 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 1445137-1450136 Chlamydomonas reinhardtii
Cre11.g467734 5.0kb downstream 5.0kb downstream 6954 true chromosome_11: 1450137-1457090 Chlamydomonas reinhardtii
Cre11.g467734 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 1452091-1457090 Chlamydomonas reinhardtii
Cre11.g467734 10.0kb upstream 10.0kb upstream 11954 true chromosome_11: 1440137-1452090 Chlamydomonas reinhardtii
Cre11.g467734 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 1440137-1450136 Chlamydomonas reinhardtii
Cre11.g467734 10.0kb downstream 10.0kb downstream 11954 true chromosome_11: 1450137-1462090 Chlamydomonas reinhardtii
Cre11.g467734 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 1452091-1462090 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076667 5260 Chlorophyte Singleton cluster - no MSA
123394740 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low  
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.028     Low  
cufflinks 0.01     Low Low
cufflinks 0.038     Low  
cufflinks 0.073     Low High
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.031     Low  
cufflinks 0.009     Low Low
cufflinks 0.026     Low  
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112     Low High
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.077     Low High
cufflinks 0.02     Low  
cufflinks 0.037     Low  
cufflinks 0.089     Low High
cufflinks 0.031     Low  
cufflinks 0.021     Low  
cufflinks 0.867383 0.0 1.84723    
cufflinks 0.0539025 0.0 0.295805 Low  
cufflinks 0.141927 0.0 0.569632 Low  
cufflinks 0.716331 0.0 1.54257    
cufflinks 0.226606 0.0 0.619972 Low  

0 Strain