Gene : PHC44 C. reinhardtii v5.6
Primary Identifier:  ? Cre11.g483351 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  535 Name:  ? Cre11.g483351
Secondary Identifier:  ? PAC:30775755
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g483351 0.5kb upstream 0.5kb upstream 6001 true chromosome_11: 3788267-3794267 Chlamydomonas reinhardtii
Cre11.g483351 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 3788267-3788766 Chlamydomonas reinhardtii
Cre11.g483351 0.5kb downstream 0.5kb downstream 6001 true chromosome_11: 3788767-3794767 Chlamydomonas reinhardtii
Cre11.g483351 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 3794268-3794767 Chlamydomonas reinhardtii
Cre11.g483351 1.0kb upstream 1.0kb upstream 6501 true chromosome_11: 3787767-3794267 Chlamydomonas reinhardtii
Cre11.g483351 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 3787767-3788766 Chlamydomonas reinhardtii
Cre11.g483351 1.0kb downstream 1.0kb downstream 6501 true chromosome_11: 3788767-3795267 Chlamydomonas reinhardtii
Cre11.g483351 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 3794268-3795267 Chlamydomonas reinhardtii
Cre11.g483351 2.0kb upstream 2.0kb upstream 7501 true chromosome_11: 3786767-3794267 Chlamydomonas reinhardtii
Cre11.g483351 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 3786767-3788766 Chlamydomonas reinhardtii
Cre11.g483351 2.0kb downstream 2.0kb downstream 7501 true chromosome_11: 3788767-3796267 Chlamydomonas reinhardtii
Cre11.g483351 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 3794268-3796267 Chlamydomonas reinhardtii
Cre11.g483351 5.0kb upstream 5.0kb upstream 10501 true chromosome_11: 3783767-3794267 Chlamydomonas reinhardtii
Cre11.g483351 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 3783767-3788766 Chlamydomonas reinhardtii
Cre11.g483351 5.0kb downstream 5.0kb downstream 10501 true chromosome_11: 3788767-3799267 Chlamydomonas reinhardtii
Cre11.g483351 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 3794268-3799267 Chlamydomonas reinhardtii
Cre11.g483351 10.0kb upstream 10.0kb upstream 15501 true chromosome_11: 3778767-3794267 Chlamydomonas reinhardtii
Cre11.g483351 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 3778767-3788766 Chlamydomonas reinhardtii
Cre11.g483351 10.0kb downstream 10.0kb downstream 15501 true chromosome_11: 3788767-3804267 Chlamydomonas reinhardtii
Cre11.g483351 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 3794268-3804267 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081391 5260 Chlorophyte View MSA
123399124 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low Low
cufflinks 11.774        
cufflinks 13.389        
cufflinks 4.523        
cufflinks 4.183        
cufflinks 6.198        
cufflinks 12.725        
cufflinks 6.98        
cufflinks 0.013     Low Low
cufflinks 0.647        
cufflinks 2.681        
cufflinks 11.279        
cufflinks 4.64        
cufflinks 3.712        
cufflinks 12.321        
cufflinks 0.023     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.844        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.261        
cufflinks 1.764        
cufflinks 0.013     Low Low
cufflinks 16.74     High  
cufflinks 4.179        
cufflinks 0.007     Low Low
cufflinks 0.558849 0.0 1.17019   Low
cufflinks 5.60592 1.04319 10.1686    
cufflinks 5.40513 0.0 11.1334    
cufflinks 3.00181 0.40823 5.5954    
cufflinks 4.91742 0.894083 8.94075    

0 Strain