Gene : PHC42 C. reinhardtii v5.6
Primary Identifier:  ? Cre11.g480451 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  465 Name:  ? Cre11.g480451
Secondary Identifier:  ? PAC:30775799
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g480451 0.5kb upstream 0.5kb upstream 14893 true chromosome_11: 3362751-3377643 Chlamydomonas reinhardtii
Cre11.g480451 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 3362751-3363250 Chlamydomonas reinhardtii
Cre11.g480451 0.5kb downstream 0.5kb downstream 14893 true chromosome_11: 3363251-3378143 Chlamydomonas reinhardtii
Cre11.g480451 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 3377644-3378143 Chlamydomonas reinhardtii
Cre11.g480451 1.0kb upstream 1.0kb upstream 15393 true chromosome_11: 3362251-3377643 Chlamydomonas reinhardtii
Cre11.g480451 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 3362251-3363250 Chlamydomonas reinhardtii
Cre11.g480451 1.0kb downstream 1.0kb downstream 15393 true chromosome_11: 3363251-3378643 Chlamydomonas reinhardtii
Cre11.g480451 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 3377644-3378643 Chlamydomonas reinhardtii
Cre11.g480451 2.0kb upstream 2.0kb upstream 16393 true chromosome_11: 3361251-3377643 Chlamydomonas reinhardtii
Cre11.g480451 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 3361251-3363250 Chlamydomonas reinhardtii
Cre11.g480451 2.0kb downstream 2.0kb downstream 16393 true chromosome_11: 3363251-3379643 Chlamydomonas reinhardtii
Cre11.g480451 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 3377644-3379643 Chlamydomonas reinhardtii
Cre11.g480451 5.0kb upstream 5.0kb upstream 19393 true chromosome_11: 3358251-3377643 Chlamydomonas reinhardtii
Cre11.g480451 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 3358251-3363250 Chlamydomonas reinhardtii
Cre11.g480451 5.0kb downstream 5.0kb downstream 19393 true chromosome_11: 3363251-3382643 Chlamydomonas reinhardtii
Cre11.g480451 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 3377644-3382643 Chlamydomonas reinhardtii
Cre11.g480451 10.0kb upstream 10.0kb upstream 24393 true chromosome_11: 3353251-3377643 Chlamydomonas reinhardtii
Cre11.g480451 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 3353251-3363250 Chlamydomonas reinhardtii
Cre11.g480451 10.0kb downstream 10.0kb downstream 24393 true chromosome_11: 3363251-3387643 Chlamydomonas reinhardtii
Cre11.g480451 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 3377644-3387643 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081822 5260 Chlorophyte View MSA
123399528 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.007     Low  
cufflinks 0.001     Low Low
cufflinks 0.004     Low  
cufflinks 0.005     Low  
cufflinks 0.003     Low  
cufflinks 0.017     Low High
cufflinks 0.002     Low  
cufflinks 0.001     Low Low
cufflinks 0.003     Low  
cufflinks 0.01     Low  
cufflinks 0.006     Low  
cufflinks 0.003     Low  
cufflinks 0.004     Low  
cufflinks 0.002     Low  
cufflinks 0.001     Low Low
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.012     Low High
cufflinks 0.012     Low High
cufflinks 0.004     Low  
cufflinks 0.0128703 0.0 0.0356658 Low Low
cufflinks 0.225932 0.0 0.551004 Low  
cufflinks 0.13934 0.0 0.402704 Low High
cufflinks 0.0179681 0.0 0.04733 Low  
cufflinks 4.23737 0.789175 7.68556    

0 Strain