Gene : CSE21 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g433800 Defline:  Predicted protein of CSE family
Genomic Order:  359 Name:  ? Cre10.g433800
Secondary Identifier:  ? PAC:30789782
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g433800 0.5kb upstream 0.5kb upstream 3976 true chromosome_10: 2193077-2197052 Chlamydomonas reinhardtii
Cre10.g433800 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 2196553-2197052 Chlamydomonas reinhardtii
Cre10.g433800 0.5kb downstream 0.5kb downstream 3976 true chromosome_10: 2192577-2196552 Chlamydomonas reinhardtii
Cre10.g433800 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 2192577-2193076 Chlamydomonas reinhardtii
Cre10.g433800 1.0kb upstream 1.0kb upstream 4476 true chromosome_10: 2193077-2197552 Chlamydomonas reinhardtii
Cre10.g433800 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 2196553-2197552 Chlamydomonas reinhardtii
Cre10.g433800 1.0kb downstream 1.0kb downstream 4476 true chromosome_10: 2192077-2196552 Chlamydomonas reinhardtii
Cre10.g433800 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 2192077-2193076 Chlamydomonas reinhardtii
Cre10.g433800 2.0kb upstream 2.0kb upstream 5476 true chromosome_10: 2193077-2198552 Chlamydomonas reinhardtii
Cre10.g433800 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 2196553-2198552 Chlamydomonas reinhardtii
Cre10.g433800 2.0kb downstream 2.0kb downstream 5476 true chromosome_10: 2191077-2196552 Chlamydomonas reinhardtii
Cre10.g433800 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 2191077-2193076 Chlamydomonas reinhardtii
Cre10.g433800 5.0kb upstream 5.0kb upstream 8476 true chromosome_10: 2193077-2201552 Chlamydomonas reinhardtii
Cre10.g433800 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 2196553-2201552 Chlamydomonas reinhardtii
Cre10.g433800 5.0kb downstream 5.0kb downstream 8476 true chromosome_10: 2188077-2196552 Chlamydomonas reinhardtii
Cre10.g433800 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 2188077-2193076 Chlamydomonas reinhardtii
Cre10.g433800 10.0kb upstream 10.0kb upstream 13476 true chromosome_10: 2193077-2206552 Chlamydomonas reinhardtii
Cre10.g433800 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 2196553-2206552 Chlamydomonas reinhardtii
Cre10.g433800 10.0kb downstream 10.0kb downstream 13476 true chromosome_10: 2183077-2196552 Chlamydomonas reinhardtii
Cre10.g433800 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 2183077-2193076 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080008 5260 Chlorophyte View MSA
123397825 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.978        
cufflinks 1.236        
cufflinks 8.963       High
cufflinks 4.641        
cufflinks 0.68        
cufflinks 0.736        
cufflinks 7.021       High
cufflinks 0.604        
cufflinks 1.591        
cufflinks 1.478        
cufflinks 6.013        
cufflinks 4.963        
cufflinks 1.163        
cufflinks 2.777        
cufflinks 9.702       High
cufflinks 1.408        
cufflinks 0.263       Low
cufflinks 7.25       High
cufflinks 0.052     Low Low
cufflinks 0.481        
cufflinks 9.575       High
cufflinks 0.145       Low
cufflinks 8.949       High
cufflinks 0.636        
cufflinks 0.077     Low Low
cufflinks 1.19379 0.0221463 2.36543    
cufflinks 0.382393 0.0 0.978933 Low  
cufflinks 0.558859 0.0 1.50545    
cufflinks 1.32829 0.0486653 2.60791    
cufflinks 3.92232 0.60732 7.23731    

0 Strain