Gene : Cre01.g015600 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR23346//PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1-RELATED // TRANSLATIONAL ACTIVATOR GCN1 Genomic Order:  357
Name:  ? Cre01.g015600 Secondary Identifier:  ? PAC:30789658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g015600 0.5kb upstream 0.5kb upstream 18482 true chromosome_1: 2652300-2670781 Chlamydomonas reinhardtii
Cre01.g015600 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 2652300-2652799 Chlamydomonas reinhardtii
Cre01.g015600 0.5kb downstream 0.5kb downstream 18482 true chromosome_1: 2652800-2671281 Chlamydomonas reinhardtii
Cre01.g015600 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 2670782-2671281 Chlamydomonas reinhardtii
Cre01.g015600 1.0kb upstream 1.0kb upstream 18982 true chromosome_1: 2651800-2670781 Chlamydomonas reinhardtii
Cre01.g015600 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 2651800-2652799 Chlamydomonas reinhardtii
Cre01.g015600 1.0kb downstream 1.0kb downstream 18982 true chromosome_1: 2652800-2671781 Chlamydomonas reinhardtii
Cre01.g015600 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 2670782-2671781 Chlamydomonas reinhardtii
Cre01.g015600 2.0kb upstream 2.0kb upstream 19982 true chromosome_1: 2650800-2670781 Chlamydomonas reinhardtii
Cre01.g015600 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 2650800-2652799 Chlamydomonas reinhardtii
Cre01.g015600 2.0kb downstream 2.0kb downstream 19982 true chromosome_1: 2652800-2672781 Chlamydomonas reinhardtii
Cre01.g015600 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 2670782-2672781 Chlamydomonas reinhardtii
Cre01.g015600 5.0kb upstream 5.0kb upstream 22982 true chromosome_1: 2647800-2670781 Chlamydomonas reinhardtii
Cre01.g015600 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 2647800-2652799 Chlamydomonas reinhardtii
Cre01.g015600 5.0kb downstream 5.0kb downstream 22982 true chromosome_1: 2652800-2675781 Chlamydomonas reinhardtii
Cre01.g015600 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 2670782-2675781 Chlamydomonas reinhardtii
Cre01.g015600 10.0kb upstream 10.0kb upstream 27982 true chromosome_1: 2642800-2670781 Chlamydomonas reinhardtii
Cre01.g015600 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 2642800-2652799 Chlamydomonas reinhardtii
Cre01.g015600 10.0kb downstream 10.0kb downstream 27982 true chromosome_1: 2652800-2680781 Chlamydomonas reinhardtii
Cre01.g015600 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 2670782-2680781 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094209 5260 Chlorophyte View MSA
123425740 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.449       Low
cufflinks 1.133        
cufflinks 1.896       High
cufflinks 1.231        
cufflinks 0.794        
cufflinks 1.45        
cufflinks 1.313        
cufflinks 1.137        
cufflinks 0.98        
cufflinks 1.873       High
cufflinks 1.066        
cufflinks 0.963        
cufflinks 1.161        
cufflinks 1.084        
cufflinks 1.637       High
cufflinks 0.851        
cufflinks 1.747       High
cufflinks 1.122        
cufflinks 0.494       Low
cufflinks 0.515       Low
cufflinks 0.988        
cufflinks 0.648       Low
cufflinks 1.059        
cufflinks 1.067        
cufflinks 0.456       Low
cufflinks 18.0848 0.0 36.65   Low
cufflinks 33.6831 6.86693 60.4993 High High
cufflinks 0.376237 0.0 0.973248   Low
cufflinks 8.36814 0.426009 16.3103   Low
cufflinks 17.8781 1.90666 33.8496   High

0 Strain