Gene : Cucsa.066080 C. sativus v1.0
Defline:  (1 of 3) PTHR19375:SF232 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37E-RELATED Genomic Order:  86
Name:  ? Cucsa.066080 Secondary Identifier:  ? PAC:16955142
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.066080 0.5kb upstream 0.5kb upstream 3466 true scaffold00696: 644904-648369 Cucumis sativus
Cucsa.066080 0.5kb upstream 0.5kb upstream 500 false scaffold00696: 644904-645403 Cucumis sativus
Cucsa.066080 0.5kb downstream 0.5kb downstream 3466 true scaffold00696: 645404-648869 Cucumis sativus
Cucsa.066080 0.5kb downstream 0.5kb downstream 500 false scaffold00696: 648370-648869 Cucumis sativus
Cucsa.066080 1.0kb upstream 1.0kb upstream 3966 true scaffold00696: 644404-648369 Cucumis sativus
Cucsa.066080 1.0kb upstream 1.0kb upstream 1000 false scaffold00696: 644404-645403 Cucumis sativus
Cucsa.066080 1.0kb downstream 1.0kb downstream 3966 true scaffold00696: 645404-649369 Cucumis sativus
Cucsa.066080 1.0kb downstream 1.0kb downstream 1000 false scaffold00696: 648370-649369 Cucumis sativus
Cucsa.066080 2.0kb upstream 2.0kb upstream 4966 true scaffold00696: 643404-648369 Cucumis sativus
Cucsa.066080 2.0kb upstream 2.0kb upstream 2000 false scaffold00696: 643404-645403 Cucumis sativus
Cucsa.066080 2.0kb downstream 2.0kb downstream 4966 true scaffold00696: 645404-650369 Cucumis sativus
Cucsa.066080 2.0kb downstream 2.0kb downstream 2000 false scaffold00696: 648370-650369 Cucumis sativus
Cucsa.066080 5.0kb upstream 5.0kb upstream 7966 true scaffold00696: 640404-648369 Cucumis sativus
Cucsa.066080 5.0kb upstream 5.0kb upstream 5000 false scaffold00696: 640404-645403 Cucumis sativus
Cucsa.066080 5.0kb downstream 5.0kb downstream 7966 true scaffold00696: 645404-653369 Cucumis sativus
Cucsa.066080 5.0kb downstream 5.0kb downstream 5000 false scaffold00696: 648370-653369 Cucumis sativus
Cucsa.066080 10.0kb upstream 10.0kb upstream 12966 true scaffold00696: 635404-648369 Cucumis sativus
Cucsa.066080 10.0kb upstream 10.0kb upstream 10000 false scaffold00696: 635404-645403 Cucumis sativus
Cucsa.066080 10.0kb downstream 10.0kb downstream 12966 true scaffold00696: 645404-658369 Cucumis sativus
Cucsa.066080 10.0kb downstream 10.0kb downstream 10000 false scaffold00696: 648370-658369 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122236994 5265 Fabidae View MSA
124071606 5270 Rosid View MSA
123753199 5271 Pentapetalae View MSA
122797693 5272 Eudicot View MSA
122051630 5273 Angiosperm View MSA
121350405 5274 Embryophyte View MSA
123428541 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain