Gene : Cucsa.272430 C. sativus v1.0
Defline:  (1 of 1) PTHR31651:SF5 - AUXIN EFFLUX CARRIER FAMILY PROTEIN-RELATED Genomic Order:  140
Name:  ? Cucsa.272430 Secondary Identifier:  ? PAC:16973716
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.272430 0.5kb upstream 0.5kb upstream 2969 true scaffold02500: 974879-977847 Cucumis sativus
Cucsa.272430 0.5kb upstream 0.5kb upstream 500 false scaffold02500: 977348-977847 Cucumis sativus
Cucsa.272430 0.5kb downstream 0.5kb downstream 2969 true scaffold02500: 974379-977347 Cucumis sativus
Cucsa.272430 0.5kb downstream 0.5kb downstream 500 false scaffold02500: 974379-974878 Cucumis sativus
Cucsa.272430 1.0kb upstream 1.0kb upstream 3469 true scaffold02500: 974879-978347 Cucumis sativus
Cucsa.272430 1.0kb upstream 1.0kb upstream 1000 false scaffold02500: 977348-978347 Cucumis sativus
Cucsa.272430 1.0kb downstream 1.0kb downstream 3469 true scaffold02500: 973879-977347 Cucumis sativus
Cucsa.272430 1.0kb downstream 1.0kb downstream 1000 false scaffold02500: 973879-974878 Cucumis sativus
Cucsa.272430 2.0kb upstream 2.0kb upstream 4469 true scaffold02500: 974879-979347 Cucumis sativus
Cucsa.272430 2.0kb upstream 2.0kb upstream 2000 false scaffold02500: 977348-979347 Cucumis sativus
Cucsa.272430 2.0kb downstream 2.0kb downstream 4469 true scaffold02500: 972879-977347 Cucumis sativus
Cucsa.272430 2.0kb downstream 2.0kb downstream 2000 false scaffold02500: 972879-974878 Cucumis sativus
Cucsa.272430 5.0kb upstream 5.0kb upstream 7469 true scaffold02500: 974879-982347 Cucumis sativus
Cucsa.272430 5.0kb upstream 5.0kb upstream 5000 false scaffold02500: 977348-982347 Cucumis sativus
Cucsa.272430 5.0kb downstream 5.0kb downstream 7469 true scaffold02500: 969879-977347 Cucumis sativus
Cucsa.272430 5.0kb downstream 5.0kb downstream 5000 false scaffold02500: 969879-974878 Cucumis sativus
Cucsa.272430 10.0kb upstream 10.0kb upstream 12469 true scaffold02500: 974879-987347 Cucumis sativus
Cucsa.272430 10.0kb upstream 10.0kb upstream 10000 false scaffold02500: 977348-987347 Cucumis sativus
Cucsa.272430 10.0kb downstream 10.0kb downstream 12469 true scaffold02500: 964879-977347 Cucumis sativus
Cucsa.272430 10.0kb downstream 10.0kb downstream 10000 false scaffold02500: 964879-974878 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026446 5273 Angiosperm View MSA
122310018 5265 Fabidae View MSA
124070797 5270 Rosid View MSA
123751038 5271 Pentapetalae View MSA
122794652 5272 Eudicot View MSA
123429004 5275 Viridiplantae View MSA
121349316 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain