Gene : Cucsa.271870 C. sativus v1.0
Defline:  (1 of 2) PTHR13711:SF202 - HIGH MOBILITY GROUP B PROTEIN 10-RELATED Genomic Order:  84
Name:  ? Cucsa.271870 Secondary Identifier:  ? PAC:16973622
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.271870 0.5kb upstream 0.5kb upstream 2105 true scaffold02500: 645289-647393 Cucumis sativus
Cucsa.271870 0.5kb upstream 0.5kb upstream 500 false scaffold02500: 646894-647393 Cucumis sativus
Cucsa.271870 0.5kb downstream 0.5kb downstream 2105 true scaffold02500: 644789-646893 Cucumis sativus
Cucsa.271870 0.5kb downstream 0.5kb downstream 500 false scaffold02500: 644789-645288 Cucumis sativus
Cucsa.271870 1.0kb upstream 1.0kb upstream 2605 true scaffold02500: 645289-647893 Cucumis sativus
Cucsa.271870 1.0kb upstream 1.0kb upstream 1000 false scaffold02500: 646894-647893 Cucumis sativus
Cucsa.271870 1.0kb downstream 1.0kb downstream 2605 true scaffold02500: 644289-646893 Cucumis sativus
Cucsa.271870 1.0kb downstream 1.0kb downstream 1000 false scaffold02500: 644289-645288 Cucumis sativus
Cucsa.271870 2.0kb upstream 2.0kb upstream 3605 true scaffold02500: 645289-648893 Cucumis sativus
Cucsa.271870 2.0kb upstream 2.0kb upstream 2000 false scaffold02500: 646894-648893 Cucumis sativus
Cucsa.271870 2.0kb downstream 2.0kb downstream 3605 true scaffold02500: 643289-646893 Cucumis sativus
Cucsa.271870 2.0kb downstream 2.0kb downstream 2000 false scaffold02500: 643289-645288 Cucumis sativus
Cucsa.271870 5.0kb upstream 5.0kb upstream 6605 true scaffold02500: 645289-651893 Cucumis sativus
Cucsa.271870 5.0kb upstream 5.0kb upstream 5000 false scaffold02500: 646894-651893 Cucumis sativus
Cucsa.271870 5.0kb downstream 5.0kb downstream 6605 true scaffold02500: 640289-646893 Cucumis sativus
Cucsa.271870 5.0kb downstream 5.0kb downstream 5000 false scaffold02500: 640289-645288 Cucumis sativus
Cucsa.271870 10.0kb upstream 10.0kb upstream 11605 true scaffold02500: 645289-656893 Cucumis sativus
Cucsa.271870 10.0kb upstream 10.0kb upstream 10000 false scaffold02500: 646894-656893 Cucumis sativus
Cucsa.271870 10.0kb downstream 10.0kb downstream 11605 true scaffold02500: 635289-646893 Cucumis sativus
Cucsa.271870 10.0kb downstream 10.0kb downstream 10000 false scaffold02500: 635289-645288 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305256 5265 Fabidae View MSA
124067121 5270 Rosid View MSA
123749147 5271 Pentapetalae View MSA
122792446 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain