Gene : Cucsa.158730 C. sativus v1.0
Defline:  (1 of 6) 3.4.24.17 - Stromelysin 1 / Transin Genomic Order:  101
Name:  ? Cucsa.158730 Secondary Identifier:  ? PAC:16965166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.158730 0.5kb upstream 0.5kb upstream 1382 true scaffold01142: 830289-831670 Cucumis sativus
Cucsa.158730 0.5kb upstream 0.5kb upstream 500 false scaffold01142: 830289-830788 Cucumis sativus
Cucsa.158730 0.5kb downstream 0.5kb downstream 1382 true scaffold01142: 830789-832170 Cucumis sativus
Cucsa.158730 0.5kb downstream 0.5kb downstream 500 false scaffold01142: 831671-832170 Cucumis sativus
Cucsa.158730 1.0kb upstream 1.0kb upstream 1882 true scaffold01142: 829789-831670 Cucumis sativus
Cucsa.158730 1.0kb upstream 1.0kb upstream 1000 false scaffold01142: 829789-830788 Cucumis sativus
Cucsa.158730 1.0kb downstream 1.0kb downstream 1882 true scaffold01142: 830789-832670 Cucumis sativus
Cucsa.158730 1.0kb downstream 1.0kb downstream 1000 false scaffold01142: 831671-832670 Cucumis sativus
Cucsa.158730 2.0kb upstream 2.0kb upstream 2882 true scaffold01142: 828789-831670 Cucumis sativus
Cucsa.158730 2.0kb upstream 2.0kb upstream 2000 false scaffold01142: 828789-830788 Cucumis sativus
Cucsa.158730 2.0kb downstream 2.0kb downstream 2882 true scaffold01142: 830789-833670 Cucumis sativus
Cucsa.158730 2.0kb downstream 2.0kb downstream 2000 false scaffold01142: 831671-833670 Cucumis sativus
Cucsa.158730 5.0kb upstream 5.0kb upstream 5882 true scaffold01142: 825789-831670 Cucumis sativus
Cucsa.158730 5.0kb upstream 5.0kb upstream 5000 false scaffold01142: 825789-830788 Cucumis sativus
Cucsa.158730 5.0kb downstream 5.0kb downstream 5882 true scaffold01142: 830789-836670 Cucumis sativus
Cucsa.158730 5.0kb downstream 5.0kb downstream 5000 false scaffold01142: 831671-836670 Cucumis sativus
Cucsa.158730 10.0kb upstream 10.0kb upstream 10882 true scaffold01142: 820789-831670 Cucumis sativus
Cucsa.158730 10.0kb upstream 10.0kb upstream 10000 false scaffold01142: 820789-830788 Cucumis sativus
Cucsa.158730 10.0kb downstream 10.0kb downstream 10882 true scaffold01142: 830789-841670 Cucumis sativus
Cucsa.158730 10.0kb downstream 10.0kb downstream 10000 false scaffold01142: 831671-841670 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606515 5273 Angiosperm View MSA
122236785 5265 Fabidae View MSA
123982995 5270 Rosid View MSA
123558669 5271 Pentapetalae View MSA
122593483 5272 Eudicot View MSA
120878805 5274 Embryophyte View MSA
122919694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain