Gene : Cucsa.153150 C. sativus v1.0
Defline:  (1 of 13) KOG0417 - Ubiquitin-protein ligase Genomic Order:  58
Name:  ? Cucsa.153150 Secondary Identifier:  ? PAC:16964651
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.153150 0.5kb upstream 0.5kb upstream 3832 true scaffold01124: 361956-365787 Cucumis sativus
Cucsa.153150 0.5kb upstream 0.5kb upstream 500 false scaffold01124: 361956-362455 Cucumis sativus
Cucsa.153150 0.5kb downstream 0.5kb downstream 3832 true scaffold01124: 362456-366287 Cucumis sativus
Cucsa.153150 0.5kb downstream 0.5kb downstream 500 false scaffold01124: 365788-366287 Cucumis sativus
Cucsa.153150 1.0kb upstream 1.0kb upstream 4332 true scaffold01124: 361456-365787 Cucumis sativus
Cucsa.153150 1.0kb upstream 1.0kb upstream 1000 false scaffold01124: 361456-362455 Cucumis sativus
Cucsa.153150 1.0kb downstream 1.0kb downstream 4332 true scaffold01124: 362456-366787 Cucumis sativus
Cucsa.153150 1.0kb downstream 1.0kb downstream 1000 false scaffold01124: 365788-366787 Cucumis sativus
Cucsa.153150 2.0kb upstream 2.0kb upstream 5332 true scaffold01124: 360456-365787 Cucumis sativus
Cucsa.153150 2.0kb upstream 2.0kb upstream 2000 false scaffold01124: 360456-362455 Cucumis sativus
Cucsa.153150 2.0kb downstream 2.0kb downstream 5332 true scaffold01124: 362456-367787 Cucumis sativus
Cucsa.153150 2.0kb downstream 2.0kb downstream 2000 false scaffold01124: 365788-367787 Cucumis sativus
Cucsa.153150 5.0kb upstream 5.0kb upstream 8332 true scaffold01124: 357456-365787 Cucumis sativus
Cucsa.153150 5.0kb upstream 5.0kb upstream 5000 false scaffold01124: 357456-362455 Cucumis sativus
Cucsa.153150 5.0kb downstream 5.0kb downstream 8332 true scaffold01124: 362456-370787 Cucumis sativus
Cucsa.153150 5.0kb downstream 5.0kb downstream 5000 false scaffold01124: 365788-370787 Cucumis sativus
Cucsa.153150 10.0kb upstream 10.0kb upstream 13332 true scaffold01124: 352456-365787 Cucumis sativus
Cucsa.153150 10.0kb upstream 10.0kb upstream 10000 false scaffold01124: 352456-362455 Cucumis sativus
Cucsa.153150 10.0kb downstream 10.0kb downstream 13332 true scaffold01124: 362456-375787 Cucumis sativus
Cucsa.153150 10.0kb downstream 10.0kb downstream 10000 false scaffold01124: 365788-375787 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300112 5265 Fabidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain