Gene : Cucsa.132610 C. sativus v1.0
Defline:  (1 of 2) PTHR11177:SF219 - CHITINASE-LIKE PROTEIN-RELATED Genomic Order:  75
Name:  ? Cucsa.132610 Secondary Identifier:  ? PAC:16962586
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.132610 0.5kb upstream 0.5kb upstream 2659 true scaffold01037: 500055-502713 Cucumis sativus
Cucsa.132610 0.5kb upstream 0.5kb upstream 500 false scaffold01037: 502214-502713 Cucumis sativus
Cucsa.132610 0.5kb downstream 0.5kb downstream 2659 true scaffold01037: 499555-502213 Cucumis sativus
Cucsa.132610 0.5kb downstream 0.5kb downstream 500 false scaffold01037: 499555-500054 Cucumis sativus
Cucsa.132610 1.0kb upstream 1.0kb upstream 3159 true scaffold01037: 500055-503213 Cucumis sativus
Cucsa.132610 1.0kb upstream 1.0kb upstream 1000 false scaffold01037: 502214-503213 Cucumis sativus
Cucsa.132610 1.0kb downstream 1.0kb downstream 3159 true scaffold01037: 499055-502213 Cucumis sativus
Cucsa.132610 1.0kb downstream 1.0kb downstream 1000 false scaffold01037: 499055-500054 Cucumis sativus
Cucsa.132610 2.0kb upstream 2.0kb upstream 4159 true scaffold01037: 500055-504213 Cucumis sativus
Cucsa.132610 2.0kb upstream 2.0kb upstream 2000 false scaffold01037: 502214-504213 Cucumis sativus
Cucsa.132610 2.0kb downstream 2.0kb downstream 4159 true scaffold01037: 498055-502213 Cucumis sativus
Cucsa.132610 2.0kb downstream 2.0kb downstream 2000 false scaffold01037: 498055-500054 Cucumis sativus
Cucsa.132610 5.0kb upstream 5.0kb upstream 7159 true scaffold01037: 500055-507213 Cucumis sativus
Cucsa.132610 5.0kb upstream 5.0kb upstream 5000 false scaffold01037: 502214-507213 Cucumis sativus
Cucsa.132610 5.0kb downstream 5.0kb downstream 7159 true scaffold01037: 495055-502213 Cucumis sativus
Cucsa.132610 5.0kb downstream 5.0kb downstream 5000 false scaffold01037: 495055-500054 Cucumis sativus
Cucsa.132610 10.0kb upstream 10.0kb upstream 12159 true scaffold01037: 500055-512213 Cucumis sativus
Cucsa.132610 10.0kb upstream 10.0kb upstream 10000 false scaffold01037: 502214-512213 Cucumis sativus
Cucsa.132610 10.0kb downstream 10.0kb downstream 12159 true scaffold01037: 490055-502213 Cucumis sativus
Cucsa.132610 10.0kb downstream 10.0kb downstream 10000 false scaffold01037: 490055-500054 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603136 5273 Angiosperm Singleton cluster - no MSA
122233383 5265 Fabidae Singleton cluster - no MSA
123979611 5270 Rosid Singleton cluster - no MSA
123555288 5271 Pentapetalae Singleton cluster - no MSA
122590102 5272 Eudicot Singleton cluster - no MSA
120875426 5274 Embryophyte Singleton cluster - no MSA
122916317 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain