Gene : Cucsa.142930 C. sativus v1.0
Defline:  (1 of 2) PTHR12741:SF21 - CALLOSE SYNTHASE 3 Genomic Order:  140
Name:  ? Cucsa.142930 Secondary Identifier:  ? PAC:16963709
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6773 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.142930 0.5kb upstream 0.5kb upstream 33903 true scaffold01079: 1213237-1247139 Cucumis sativus
Cucsa.142930 0.5kb upstream 0.5kb upstream 500 false scaffold01079: 1246640-1247139 Cucumis sativus
Cucsa.142930 0.5kb downstream 0.5kb downstream 33903 true scaffold01079: 1212737-1246639 Cucumis sativus
Cucsa.142930 0.5kb downstream 0.5kb downstream 500 false scaffold01079: 1212737-1213236 Cucumis sativus
Cucsa.142930 1.0kb upstream 1.0kb upstream 34403 true scaffold01079: 1213237-1247639 Cucumis sativus
Cucsa.142930 1.0kb upstream 1.0kb upstream 1000 false scaffold01079: 1246640-1247639 Cucumis sativus
Cucsa.142930 1.0kb downstream 1.0kb downstream 34403 true scaffold01079: 1212237-1246639 Cucumis sativus
Cucsa.142930 1.0kb downstream 1.0kb downstream 1000 false scaffold01079: 1212237-1213236 Cucumis sativus
Cucsa.142930 2.0kb upstream 2.0kb upstream 35403 true scaffold01079: 1213237-1248639 Cucumis sativus
Cucsa.142930 2.0kb upstream 2.0kb upstream 2000 false scaffold01079: 1246640-1248639 Cucumis sativus
Cucsa.142930 2.0kb downstream 2.0kb downstream 35403 true scaffold01079: 1211237-1246639 Cucumis sativus
Cucsa.142930 2.0kb downstream 2.0kb downstream 2000 false scaffold01079: 1211237-1213236 Cucumis sativus
Cucsa.142930 5.0kb upstream 5.0kb upstream 38403 true scaffold01079: 1213237-1251639 Cucumis sativus
Cucsa.142930 5.0kb upstream 5.0kb upstream 5000 false scaffold01079: 1246640-1251639 Cucumis sativus
Cucsa.142930 5.0kb downstream 5.0kb downstream 38403 true scaffold01079: 1208237-1246639 Cucumis sativus
Cucsa.142930 5.0kb downstream 5.0kb downstream 5000 false scaffold01079: 1208237-1213236 Cucumis sativus
Cucsa.142930 10.0kb upstream 10.0kb upstream 43403 true scaffold01079: 1213237-1256639 Cucumis sativus
Cucsa.142930 10.0kb upstream 10.0kb upstream 10000 false scaffold01079: 1246640-1256639 Cucumis sativus
Cucsa.142930 10.0kb downstream 10.0kb downstream 43403 true scaffold01079: 1203237-1246639 Cucumis sativus
Cucsa.142930 10.0kb downstream 10.0kb downstream 10000 false scaffold01079: 1203237-1213236 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301991 5265 Fabidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain