Gene : Cucsa.124400 C. sativus v1.0
Defline:  (1 of 2) PTHR11709:SF116 - LACCASE-11 Genomic Order:  48
Name:  ? Cucsa.124400 Secondary Identifier:  ? PAC:16961708
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5466 Cucumis sativus pathologic  
Csativus PWY-6824 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.124400 0.5kb upstream 0.5kb upstream 3297 true scaffold01001: 331187-334483 Cucumis sativus
Cucsa.124400 0.5kb upstream 0.5kb upstream 500 false scaffold01001: 331187-331686 Cucumis sativus
Cucsa.124400 0.5kb downstream 0.5kb downstream 3297 true scaffold01001: 331687-334983 Cucumis sativus
Cucsa.124400 0.5kb downstream 0.5kb downstream 500 false scaffold01001: 334484-334983 Cucumis sativus
Cucsa.124400 1.0kb upstream 1.0kb upstream 3797 true scaffold01001: 330687-334483 Cucumis sativus
Cucsa.124400 1.0kb upstream 1.0kb upstream 1000 false scaffold01001: 330687-331686 Cucumis sativus
Cucsa.124400 1.0kb downstream 1.0kb downstream 3797 true scaffold01001: 331687-335483 Cucumis sativus
Cucsa.124400 1.0kb downstream 1.0kb downstream 1000 false scaffold01001: 334484-335483 Cucumis sativus
Cucsa.124400 2.0kb upstream 2.0kb upstream 4797 true scaffold01001: 329687-334483 Cucumis sativus
Cucsa.124400 2.0kb upstream 2.0kb upstream 2000 false scaffold01001: 329687-331686 Cucumis sativus
Cucsa.124400 2.0kb downstream 2.0kb downstream 4797 true scaffold01001: 331687-336483 Cucumis sativus
Cucsa.124400 2.0kb downstream 2.0kb downstream 2000 false scaffold01001: 334484-336483 Cucumis sativus
Cucsa.124400 5.0kb upstream 5.0kb upstream 7797 true scaffold01001: 326687-334483 Cucumis sativus
Cucsa.124400 5.0kb upstream 5.0kb upstream 5000 false scaffold01001: 326687-331686 Cucumis sativus
Cucsa.124400 5.0kb downstream 5.0kb downstream 7797 true scaffold01001: 331687-339483 Cucumis sativus
Cucsa.124400 5.0kb downstream 5.0kb downstream 5000 false scaffold01001: 334484-339483 Cucumis sativus
Cucsa.124400 10.0kb upstream 10.0kb upstream 12797 true scaffold01001: 321687-334483 Cucumis sativus
Cucsa.124400 10.0kb upstream 10.0kb upstream 10000 false scaffold01001: 321687-331686 Cucumis sativus
Cucsa.124400 10.0kb downstream 10.0kb downstream 12797 true scaffold01001: 331687-344483 Cucumis sativus
Cucsa.124400 10.0kb downstream 10.0kb downstream 10000 false scaffold01001: 334484-344483 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237372 5265 Fabidae View MSA
124072546 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain