Gene : Cucsa.125480 C. sativus v1.0
Defline:  (1 of 8) 6.2.1.3 - Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase Genomic Order:  21
Name:  ? Cucsa.125480 Secondary Identifier:  ? PAC:16961847
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1121 Cucumis sativus pathologic  
Csativus PWY-321 Cucumis sativus pathologic  
Csativus PWY-5136 Cucumis sativus pathologic  
Csativus PWY-5143 Cucumis sativus pathologic  
Csativus PWY-5147 Cucumis sativus pathologic  
Csativus PWY-5156 Cucumis sativus pathologic  
Csativus PWY-561 Cucumis sativus pathologic  
Csativus PWY-5885 Cucumis sativus pathologic  
Csativus PWY-5971 Cucumis sativus pathologic  
Csativus PWY-5989 Cucumis sativus pathologic  
Csativus PWY66-389 Cucumis sativus pathologic  
Csativus PWY-6733 Cucumis sativus pathologic  
Csativus PWY-6803 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.125480 0.5kb upstream 0.5kb upstream 6797 true scaffold01004: 229009-235805 Cucumis sativus
Cucsa.125480 0.5kb upstream 0.5kb upstream 500 false scaffold01004: 229009-229508 Cucumis sativus
Cucsa.125480 0.5kb downstream 0.5kb downstream 6797 true scaffold01004: 229509-236305 Cucumis sativus
Cucsa.125480 0.5kb downstream 0.5kb downstream 500 false scaffold01004: 235806-236305 Cucumis sativus
Cucsa.125480 1.0kb upstream 1.0kb upstream 7297 true scaffold01004: 228509-235805 Cucumis sativus
Cucsa.125480 1.0kb upstream 1.0kb upstream 1000 false scaffold01004: 228509-229508 Cucumis sativus
Cucsa.125480 1.0kb downstream 1.0kb downstream 7297 true scaffold01004: 229509-236805 Cucumis sativus
Cucsa.125480 1.0kb downstream 1.0kb downstream 1000 false scaffold01004: 235806-236805 Cucumis sativus
Cucsa.125480 2.0kb upstream 2.0kb upstream 8297 true scaffold01004: 227509-235805 Cucumis sativus
Cucsa.125480 2.0kb upstream 2.0kb upstream 2000 false scaffold01004: 227509-229508 Cucumis sativus
Cucsa.125480 2.0kb downstream 2.0kb downstream 8297 true scaffold01004: 229509-237805 Cucumis sativus
Cucsa.125480 2.0kb downstream 2.0kb downstream 2000 false scaffold01004: 235806-237805 Cucumis sativus
Cucsa.125480 5.0kb upstream 5.0kb upstream 11297 true scaffold01004: 224509-235805 Cucumis sativus
Cucsa.125480 5.0kb upstream 5.0kb upstream 5000 false scaffold01004: 224509-229508 Cucumis sativus
Cucsa.125480 5.0kb downstream 5.0kb downstream 11297 true scaffold01004: 229509-240805 Cucumis sativus
Cucsa.125480 5.0kb downstream 5.0kb downstream 5000 false scaffold01004: 235806-240805 Cucumis sativus
Cucsa.125480 10.0kb upstream 10.0kb upstream 16297 true scaffold01004: 219509-235805 Cucumis sativus
Cucsa.125480 10.0kb upstream 10.0kb upstream 10000 false scaffold01004: 219509-229508 Cucumis sativus
Cucsa.125480 10.0kb downstream 10.0kb downstream 16297 true scaffold01004: 229509-245805 Cucumis sativus
Cucsa.125480 10.0kb downstream 10.0kb downstream 10000 false scaffold01004: 235806-245805 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310133 5265 Fabidae View MSA
124061354 5270 Rosid View MSA
123752454 5271 Pentapetalae View MSA
122793433 5272 Eudicot View MSA
122043252 5273 Angiosperm View MSA
121348478 5274 Embryophyte View MSA
123380877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain