Gene : Cucsa.126670 C. sativus v1.0
Defline:  (1 of 1) PTHR12741:SF23 - CALLOSE SYNTHASE 11 Genomic Order:  72
Name:  ? Cucsa.126670 Secondary Identifier:  ? PAC:16961957
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6773 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.126670 0.5kb upstream 0.5kb upstream 6385 true scaffold01017: 539049-545433 Cucumis sativus
Cucsa.126670 0.5kb upstream 0.5kb upstream 500 false scaffold01017: 539049-539548 Cucumis sativus
Cucsa.126670 0.5kb downstream 0.5kb downstream 6385 true scaffold01017: 539549-545933 Cucumis sativus
Cucsa.126670 0.5kb downstream 0.5kb downstream 500 false scaffold01017: 545434-545933 Cucumis sativus
Cucsa.126670 1.0kb upstream 1.0kb upstream 6885 true scaffold01017: 538549-545433 Cucumis sativus
Cucsa.126670 1.0kb upstream 1.0kb upstream 1000 false scaffold01017: 538549-539548 Cucumis sativus
Cucsa.126670 1.0kb downstream 1.0kb downstream 6885 true scaffold01017: 539549-546433 Cucumis sativus
Cucsa.126670 1.0kb downstream 1.0kb downstream 1000 false scaffold01017: 545434-546433 Cucumis sativus
Cucsa.126670 2.0kb upstream 2.0kb upstream 7885 true scaffold01017: 537549-545433 Cucumis sativus
Cucsa.126670 2.0kb upstream 2.0kb upstream 2000 false scaffold01017: 537549-539548 Cucumis sativus
Cucsa.126670 2.0kb downstream 2.0kb downstream 7885 true scaffold01017: 539549-547433 Cucumis sativus
Cucsa.126670 2.0kb downstream 2.0kb downstream 2000 false scaffold01017: 545434-547433 Cucumis sativus
Cucsa.126670 5.0kb upstream 5.0kb upstream 10885 true scaffold01017: 534549-545433 Cucumis sativus
Cucsa.126670 5.0kb upstream 5.0kb upstream 5000 false scaffold01017: 534549-539548 Cucumis sativus
Cucsa.126670 5.0kb downstream 5.0kb downstream 10885 true scaffold01017: 539549-550433 Cucumis sativus
Cucsa.126670 5.0kb downstream 5.0kb downstream 5000 false scaffold01017: 545434-550433 Cucumis sativus
Cucsa.126670 10.0kb upstream 10.0kb upstream 15885 true scaffold01017: 529549-545433 Cucumis sativus
Cucsa.126670 10.0kb upstream 10.0kb upstream 10000 false scaffold01017: 529549-539548 Cucumis sativus
Cucsa.126670 10.0kb downstream 10.0kb downstream 15885 true scaffold01017: 539549-555433 Cucumis sativus
Cucsa.126670 10.0kb downstream 10.0kb downstream 10000 false scaffold01017: 545434-555433 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304010 5265 Fabidae View MSA
124060477 5270 Rosid View MSA
123738977 5271 Pentapetalae View MSA
122786097 5272 Eudicot View MSA
122047252 5273 Angiosperm View MSA
121350051 5274 Embryophyte View MSA
123381555 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain