Gene : Cucsa.120890 C. sativus v1.0
Defline:  (1 of 4) PF01117 - Aerolysin toxin (Aerolysin) Genomic Order:  267
Name:  ? Cucsa.120890 Secondary Identifier:  ? PAC:16961232
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.120890 0.5kb upstream 0.5kb upstream 2150 true scaffold00998: 2930645-2932794 Cucumis sativus
Cucsa.120890 0.5kb upstream 0.5kb upstream 500 false scaffold00998: 2932295-2932794 Cucumis sativus
Cucsa.120890 0.5kb downstream 0.5kb downstream 2150 true scaffold00998: 2930145-2932294 Cucumis sativus
Cucsa.120890 0.5kb downstream 0.5kb downstream 500 false scaffold00998: 2930145-2930644 Cucumis sativus
Cucsa.120890 1.0kb upstream 1.0kb upstream 2650 true scaffold00998: 2930645-2933294 Cucumis sativus
Cucsa.120890 1.0kb upstream 1.0kb upstream 1000 false scaffold00998: 2932295-2933294 Cucumis sativus
Cucsa.120890 1.0kb downstream 1.0kb downstream 2650 true scaffold00998: 2929645-2932294 Cucumis sativus
Cucsa.120890 1.0kb downstream 1.0kb downstream 1000 false scaffold00998: 2929645-2930644 Cucumis sativus
Cucsa.120890 2.0kb upstream 2.0kb upstream 3650 true scaffold00998: 2930645-2934294 Cucumis sativus
Cucsa.120890 2.0kb upstream 2.0kb upstream 2000 false scaffold00998: 2932295-2934294 Cucumis sativus
Cucsa.120890 2.0kb downstream 2.0kb downstream 3650 true scaffold00998: 2928645-2932294 Cucumis sativus
Cucsa.120890 2.0kb downstream 2.0kb downstream 2000 false scaffold00998: 2928645-2930644 Cucumis sativus
Cucsa.120890 5.0kb upstream 5.0kb upstream 6650 true scaffold00998: 2930645-2937294 Cucumis sativus
Cucsa.120890 5.0kb upstream 5.0kb upstream 5000 false scaffold00998: 2932295-2937294 Cucumis sativus
Cucsa.120890 5.0kb downstream 5.0kb downstream 6650 true scaffold00998: 2925645-2932294 Cucumis sativus
Cucsa.120890 5.0kb downstream 5.0kb downstream 5000 false scaffold00998: 2925645-2930644 Cucumis sativus
Cucsa.120890 10.0kb upstream 10.0kb upstream 11650 true scaffold00998: 2930645-2942294 Cucumis sativus
Cucsa.120890 10.0kb upstream 10.0kb upstream 10000 false scaffold00998: 2932295-2942294 Cucumis sativus
Cucsa.120890 10.0kb downstream 10.0kb downstream 11650 true scaffold00998: 2920645-2932294 Cucumis sativus
Cucsa.120890 10.0kb downstream 10.0kb downstream 10000 false scaffold00998: 2920645-2930644 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029421 5273 Angiosperm View MSA
122236927 5265 Fabidae View MSA
124072797 5270 Rosid View MSA
123745927 5271 Pentapetalae View MSA
122794125 5272 Eudicot View MSA
121348691 5274 Embryophyte View MSA
123380974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain