Gene : Cucsa.122790 C. sativus v1.0
Defline:  (1 of 3) PTHR13301:SF69 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  15
Name:  ? Cucsa.122790 Secondary Identifier:  ? PAC:16961502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.122790 0.5kb upstream 0.5kb upstream 2708 true scaffold01000: 156357-159064 Cucumis sativus
Cucsa.122790 0.5kb upstream 0.5kb upstream 500 false scaffold01000: 158565-159064 Cucumis sativus
Cucsa.122790 0.5kb downstream 0.5kb downstream 2708 true scaffold01000: 155857-158564 Cucumis sativus
Cucsa.122790 0.5kb downstream 0.5kb downstream 500 false scaffold01000: 155857-156356 Cucumis sativus
Cucsa.122790 1.0kb upstream 1.0kb upstream 3208 true scaffold01000: 156357-159564 Cucumis sativus
Cucsa.122790 1.0kb upstream 1.0kb upstream 1000 false scaffold01000: 158565-159564 Cucumis sativus
Cucsa.122790 1.0kb downstream 1.0kb downstream 3208 true scaffold01000: 155357-158564 Cucumis sativus
Cucsa.122790 1.0kb downstream 1.0kb downstream 1000 false scaffold01000: 155357-156356 Cucumis sativus
Cucsa.122790 2.0kb upstream 2.0kb upstream 4208 true scaffold01000: 156357-160564 Cucumis sativus
Cucsa.122790 2.0kb upstream 2.0kb upstream 2000 false scaffold01000: 158565-160564 Cucumis sativus
Cucsa.122790 2.0kb downstream 2.0kb downstream 4208 true scaffold01000: 154357-158564 Cucumis sativus
Cucsa.122790 2.0kb downstream 2.0kb downstream 2000 false scaffold01000: 154357-156356 Cucumis sativus
Cucsa.122790 5.0kb upstream 5.0kb upstream 7208 true scaffold01000: 156357-163564 Cucumis sativus
Cucsa.122790 5.0kb upstream 5.0kb upstream 5000 false scaffold01000: 158565-163564 Cucumis sativus
Cucsa.122790 5.0kb downstream 5.0kb downstream 7208 true scaffold01000: 151357-158564 Cucumis sativus
Cucsa.122790 5.0kb downstream 5.0kb downstream 5000 false scaffold01000: 151357-156356 Cucumis sativus
Cucsa.122790 10.0kb upstream 10.0kb upstream 12208 true scaffold01000: 156357-168564 Cucumis sativus
Cucsa.122790 10.0kb upstream 10.0kb upstream 10000 false scaffold01000: 158565-168564 Cucumis sativus
Cucsa.122790 10.0kb downstream 10.0kb downstream 12208 true scaffold01000: 146357-158564 Cucumis sativus
Cucsa.122790 10.0kb downstream 10.0kb downstream 10000 false scaffold01000: 146357-156356 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311969 5265 Fabidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain